RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 HOXC11O43248 304 aaPredicted RBP21.64■■□□□ 1.05
LSM6-207ENST00000515311 CREB3O43889 395 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 TSPAN3O60637 253 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 PENKP01210 267 aaPredicted RBP21.64■■□□□ 1.05
LSM6-207ENST00000515311 COPS2P61201 443 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 ETF1P62495 437 aaKnown RBP21.64■■□□□ 1.05
LSM6-207ENST00000515311 TDGQ13569 410 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 DHCR24Q15392 516 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 TAZQ16635 292 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 LY6G5CQ5SRR4 150 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 RNF43Q68DV7 783 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 RFX8Q6ZV50 586 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 MYEOVQ96EZ4 313 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 WDR24Q96S15 920 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 CALN1Q9BXU9 219 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 ZYG11BQ9C0D3 744 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 ECT2Q9H8V3 914 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 CWC15Q9P013 229 aaKnown RBP21.64■■□□□ 1.05
LSM6-207ENST00000515311 TCF20Q9UGU0 1960 aaKnown RBP21.64■■□□□ 1.05
LSM6-207ENST00000515311 MYOFQ9NZM1 2061 aa21.64■■□□□ 1.05
LSM6-207ENST00000515311 A0A1B0GVM2 712 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 TCAF2A6NFQ2 919 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 CD48P09326 243 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 ADH5P11766 374 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 GOT1P17174 413 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 IL4RP24394 825 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 EPHB2P29323 1055 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 SGSHP51688 502 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 RPS24P62847 133 aaKnown RBP21.63■■□□□ 1.05
LSM6-207ENST00000515311 NR1H3Q13133 447 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 RUNX3Q13761 415 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 DPYSQ14117 519 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 FYB2Q5VWT5 728 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 TPGS1Q6ZTW0 290 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 CHST9Q7L1S5 443 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 DDI1Q8WTU0 396 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 DNASE1L2Q92874 299 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 FAF2Q96CS3 445 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 CSPG4P5Q96PW8 444 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 BBS2Q9BXC9 721 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 STIM2Q9P246 746 aa21.63■■□□□ 1.05
LSM6-207ENST00000515311 KIAA1549LQ6ZVL6 1849 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 PI4K2BG5E9Z4 385 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 CLDN11O75508 207 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 RHOQP17081 205 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 HOXD9P28356 352 aaPredicted RBP21.62■■□□□ 1.05
LSM6-207ENST00000515311 CDKN2BP42772 138 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 GAD2Q05329 585 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 TNK2Q07912 1038 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 ITPRIPL2Q3MIP1 535 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 RWDD4Q6NW29 188 aaKnown RBP21.62■■□□□ 1.05
LSM6-207ENST00000515311 SPOCD1Q6ZMY3 1216 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 CFAP52Q8N1V2 620 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 CARD9Q9H257 536 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 CATSPERBQ9H7T0 1116 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 PRDM16Q9HAZ2 1276 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 SLC2A4RGQ9NR83 387 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 DONSONQ9NYP3 566 aa21.62■■□□□ 1.05
LSM6-207ENST00000515311 OTOL1A6NHN0 477 aaPredicted RBP21.61■■□□□ 1.05
LSM6-207ENST00000515311 WASH4PA8MWX3 477 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 NEDD8-MDP1E9PL57 170 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 ENC1O14682 589 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 TBL1XO60907 577 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 TUBB4AP04350 444 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 SRFP11831 508 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 PTPN7P35236 360 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 CETN2P41208 172 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 IRAK1P51617 712 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 CDH4P55283 916 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 PFKPQ01813 784 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 PPP2R5EQ16537 467 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 ANO4Q32M45 955 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 ANKRD20A8PQ5CZ79 823 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 TFDP3Q5H9I0 405 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 DCAF12L1Q5VU92 463 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 MFSD7Q6UXD7 560 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 NLRP14Q86W24 1093 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 ZNF557Q8N988 423 aaPredicted RBP21.61■■□□□ 1.05
LSM6-207ENST00000515311 CSGALNACT1Q8TDX6 532 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 RNF25Q96BH1 459 aaPredicted RBP21.61■■□□□ 1.05
LSM6-207ENST00000515311 P2RY11Q96G91 374 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 C16orf45Q96MC5 204 aaPredicted RBP21.61■■□□□ 1.05
LSM6-207ENST00000515311 NAPGQ99747 312 aaPredicted RBP21.61■■□□□ 1.05
LSM6-207ENST00000515311 ARHGEF4Q9NR80 690 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 TMEM248Q9NWD8 314 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 GTSE1Q9NYZ3 720 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 MPP6Q9NZW5 540 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 ZNF212Q9UDV6 495 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 SORCS3Q9UPU3 1222 aa21.61■■□□□ 1.05
LSM6-207ENST00000515311 CTAGE9A4FU28 777 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 KIF2AO00139 706 aaPredicted RBP21.6■■□□□ 1.05
LSM6-207ENST00000515311 KCNK3O14649 394 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 DAPK3O43293 454 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 CACNG3O60359 315 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 CNTN5O94779 1100 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 ATP1A1P05023 1023 aaKnown RBP21.6■■□□□ 1.05
LSM6-207ENST00000515311 PYGMP11217 842 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 TYRP14679 529 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 DNA2P51530 1060 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 MMRN1Q13201 1228 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms