RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TNFRSF8P28908 595 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 CAP2P40123 477 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MTTPP55157 894 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 C1QBPQ07021 282 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 TMEM62Q0P6H9 643 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 FRG1Q14331 258 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 SLC5A9Q2M3M2 681 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 TIGD7Q6NT04 549 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 KRT77Q7Z794 578 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ZNF605Q86T29 641 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ACOT1Q86TX2 421 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MREGQ8N565 214 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ZCCHC9Q8N567 271 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ARL10Q8N8L6 244 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 PIWIL2Q8TC59 973 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 TMC2Q8TDI7 906 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 CLPBQ9H078 707 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 DNAJC18Q9H819 358 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 TUBA8Q9NY65 449 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 NFKBIL1Q9UBC1 381 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ANAPC2Q9UJX6 822 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MAGEB16A2A368 324 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 DDX3XO00571 662 aaKnown RBP eCLIP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 F9P00740 461 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 LRPAP1P30533 357 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 RFX3P48380 749 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 SRP54P61011 504 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 EPS8Q12929 822 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 BROXQ5VW32 411 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 EFCAB12Q6NXP0 572 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ERAP2Q6P179 960 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 KIAA0895Q8NCT3 520 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 YIPF2Q9BWQ6 316 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 CAPN10Q9HC96 672 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MID1IP1Q9NPA3 183 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 WDR27A2RRH5 827 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 ANXA6P08133 673 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 IRF1P10914 325 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 MYL12AP19105 171 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 CSNK2BP67870 215 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 C10orf120Q5SQS8 335 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 TTC23Q5W5X9 447 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 TMC7Q7Z402 723 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 PTAR1Q7Z6K3 402 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-214ENST00000515035 DCP1BQ8IZD4 617 aaKnown RBP13.56□□□□□ -0.24
TCOF1-214ENST00000515035 CACTIN-AS1Q8N1I8 211 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 ANKRD49Q8WVL7 239 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 STON1Q9Y6Q2 735 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 TNS2Q63HR2 1409 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 H3BN98 237 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 ITGAXP20702 1163 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 PNPLA4P41247 253 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 HARS2P49590 506 aaKnown RBP13.56□□□□□ -0.24
TCOF1-214ENST00000515035 DDR1Q08345 913 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 UTS2BQ765I0 119 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 ZBTB46Q86UZ6 589 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 PSMA8Q8TAA3 256 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 DNPEPQ9ULA0 475 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 CDH9Q9ULB4 789 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 NPTXRO95502 500 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 MYBL2P10244 700 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 SLC2A3P11169 496 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 GARTP22102 1010 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 CYP2F1P24903 491 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 CCNG1P51959 295 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 AMHR2Q16671 573 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 NT5DC1Q5TFE4 455 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 MFSD7Q6UXD7 560 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 ABRAQ8N0Z2 381 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 SFRP1Q8N474 314 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 ZNF614Q8N883 585 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 PRMT6Q96LA8 375 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-214ENST00000515035 CHST7Q9NS84 486 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 R3HDM2Q9Y2K5 976 aaKnown RBP13.56□□□□□ -0.24
TCOF1-214ENST00000515035 SYNCRIPO60506 623 aaKnown RBP13.56□□□□□ -0.24
TCOF1-214ENST00000515035 PIGNO95427 931 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 KRT6AP02538 564 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 VEGFAP15692 232 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-214ENST00000515035 YY1P25490 414 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 POU6F1Q14863 301 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 MZT2BQ6NZ67 158 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 KRT74Q7RTS7 529 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 ZNF720Q7Z2F6 126 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 KCNMB4Q86W47 210 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 TMEM165Q9HC07 324 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 DPP3Q9NY33 737 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 PCDHGC5Q9Y5F6 944 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 ADGRB1O14514 1584 aa13.56□□□□□ -0.24
TCOF1-214ENST00000515035 FER1L4A9Z1Z3 1794 aa13.55□□□□□ -0.24
TCOF1-214ENST00000515035 RRN3P2A6NIE6 340 aa13.55□□□□□ -0.24
TCOF1-214ENST00000515035 CLTBP09497 229 aa13.55□□□□□ -0.24
TCOF1-214ENST00000515035 TSPAN19P0C672 248 aa13.55□□□□□ -0.24
TCOF1-214ENST00000515035 CPT1AP50416 773 aa13.55□□□□□ -0.24
TCOF1-214ENST00000515035 STX4Q12846 297 aa13.55□□□□□ -0.24
TCOF1-214ENST00000515035 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
TCOF1-214ENST00000515035 ZNF554Q86TJ5 538 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms