RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 EPHB6O15197 1021 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 ZNF18P17022 549 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 HOXD12P35452 270 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 SCNN1AP37088 669 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 JAM2P57087 298 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 POLR2FP61218 127 aaKnown RBP23.83■■□□□ 1.41
CLDND1-230ENST00000514537 ZNF677Q86XU0 584 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 SLC41A1Q8IVJ1 513 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 ANKRD20A12PQ8NF67 263 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 RNF34Q969K3 372 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 HSD3B7Q9H2F3 369 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 WSB2Q9NYS7 404 aaPredicted RBP23.83■■□□□ 1.41
CLDND1-230ENST00000514537 RRN3Q9NYV6 651 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 COX16Q9P0S2 106 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 TMEM63CQ9P1W3 806 aa23.83■■□□□ 1.41
CLDND1-230ENST00000514537 M0QYT0 321 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 NDUFS2O75306 463 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 IGLV3-19P01714 112 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 ASLP04424 464 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 MMEP08473 750 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 CSKP41240 450 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 TPMTP51580 245 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 NME3Q13232 169 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 MTA1Q13330 715 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 TRIM61Q5EBN2 209 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 OTUD1Q5VV17 481 aaPredicted RBP23.82■■□□□ 1.4
CLDND1-230ENST00000514537 MMS22LQ6ZRQ5 1243 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 XYLT1Q86Y38 959 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 ZNF366Q8N895 744 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 NT5C3BQ969T7 300 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 MYO19Q96H55 970 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 NPY6RQ99463 290 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 PRSS16Q9NQE7 514 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.82■■□□□ 1.4
CLDND1-230ENST00000514537 KIAA1522Q9P206 1035 aaPredicted RBP23.82■■□□□ 1.4
CLDND1-230ENST00000514537 SUN2Q9UH99 717 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 NOCTQ9UK39 431 aaKnown RBP23.82■■□□□ 1.4
CLDND1-230ENST00000514537 NUP205Q92621 2012 aa23.82■■□□□ 1.4
CLDND1-230ENST00000514537 CNOT1A5YKK6 2376 aaKnown RBP23.81■■□□□ 1.4
CLDND1-230ENST00000514537 LGALS16A8MUM7 142 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 H0Y626 953 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 GFPT2O94808 682 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 OXTRP30559 389 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 SOX5P35711 763 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 RNASE9P60153 205 aaKnown RBP23.81■■□□□ 1.4
CLDND1-230ENST00000514537 NOMO3P69849 1222 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 TYRO3Q06418 890 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 SYCP1Q15431 976 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 PITRM1Q5JRX3 1037 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 FBXL22Q6P050 247 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 SLC23A3Q6PIS1 610 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 APTXQ7Z2E3 356 aaKnown RBP23.81■■□□□ 1.4
CLDND1-230ENST00000514537 CEP76Q8TAP6 659 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 TOE1Q96GM8 510 aaKnown RBP23.81■■□□□ 1.4
CLDND1-230ENST00000514537 MRGPRX3Q96LB0 322 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 HSPA12BQ96MM6 686 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 ADAM33Q9BZ11 813 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 FBRSQ9HAH7 460 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 NLRC4Q9NPP4 1024 aa23.81■■□□□ 1.4
CLDND1-230ENST00000514537 ATXN2Q99700 1313 aaKnown RBP23.81■■□□□ 1.4
CLDND1-230ENST00000514537 C4orf47A7E2U8 309 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 CDX4O14627 284 aaPredicted RBP23.8■■□□□ 1.4
CLDND1-230ENST00000514537 ACADMP11310 421 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 CDK11BP21127 795 aaKnown RBP23.8■■□□□ 1.4
CLDND1-230ENST00000514537 AUHQ13825 339 aaKnown RBP23.8■■□□□ 1.4
CLDND1-230ENST00000514537 CKAP5Q14008 2032 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 DUOXA1Q1HG43 343 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 TTC39BQ5VTQ0 682 aaPredicted RBP23.8■■□□□ 1.4
CLDND1-230ENST00000514537 KDM1BQ8NB78 822 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 SLC20A1Q8WUM9 679 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 CPA5Q8WXQ8 436 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 FOXJ1Q92949 421 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 PGAP3Q96FM1 320 aaPredicted RBP23.8■■□□□ 1.4
CLDND1-230ENST00000514537 NUSAP1Q9BXS6 441 aaKnown RBP23.8■■□□□ 1.4
CLDND1-230ENST00000514537 STAP1Q9ULZ2 295 aa23.8■■□□□ 1.4
CLDND1-230ENST00000514537 MOCS3O95396 460 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 CYP1A1P04798 512 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-230ENST00000514537 CHRNB2P17787 502 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 TFE3P19532 575 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-230ENST00000514537 CXCR3P49682 368 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 ST8SIA6P61647 398 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 CDR2Q01850 454 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 UBXN1Q04323 297 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 PLEKHG6Q3KR16 790 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 C2CD6Q53TS8 623 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 PPM1JQ5JR12 505 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 RABGAP1LQ5R372 815 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 FAM102AQ5T9C2 384 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-230ENST00000514537 NAA35Q5VZE5 725 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 CCAR2Q8N163 923 aaKnown RBP23.79■■□□□ 1.4
CLDND1-230ENST00000514537 MSANTD4Q8NCY6 345 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 IGSF8Q969P0 613 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 SPAG5Q96R06 1193 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 ERGIC2Q96RQ1 377 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 NUP58Q9BVL2 599 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 TMEM9BQ9NQ34 198 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 PIGVQ9NUD9 493 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 ARHGEF38Q9NXL2 777 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 ERVW-1Q9UQF0 538 aa23.79■■□□□ 1.4
CLDND1-230ENST00000514537 HS3ST4Q9Y661 456 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms