RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 USP30Q70CQ3 517 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 TMEM86AQ8N2M4 240 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 CSGALNACT2Q8N6G5 542 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 PDZD8Q8NEN9 1154 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 OR6B3Q8NGW1 331 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 USP7Q93009 1102 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 DUSP23Q9BVJ7 150 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 PABPC3Q9H361 631 aaKnown RBP3.4□□□□□ -1.86
CHD1-211ENST00000514344 EVA1BQ9NVM1 165 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 LUZP4Q9P127 313 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 ARHGAP20Q9P2F6 1191 aa3.4□□□□□ -1.86
CHD1-211ENST00000514344 A0A0B4J269 797 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 SLC12A8A0AV02 714 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 TARSL2A2RTX5 802 aaKnown RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 EME2A4GXA9 379 aaPredicted RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 BHMG1C9JSJ3 638 aaPredicted RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 GABRDO14764 452 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 MAGEC1O60732 1142 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 RNASEH1O60930 286 aaKnown RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 SIN3BO75182 1162 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 CNTN5O94779 1100 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 PENKP01210 267 aaPredicted RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 KLKB1P03952 638 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 ADRB2P07550 413 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 LIFP15018 202 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 SLC8A1P32418 973 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 ATP5C1P36542 298 aaKnown RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 PNPLA4P41247 253 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 PSMD8P48556 350 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 METAP1P53582 386 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 WNT7BP56706 349 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 SEPT6Q14141 434 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 MAPRE1Q15691 268 aaKnown RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 DEFB109BQ30KR1 87 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 PRR30Q53SZ7 412 aaPredicted RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 ATP1A1-AS1Q5TC04 95 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 OR6B2Q6IFH4 312 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 RINT1Q6NUQ1 792 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 CHST9Q7L1S5 443 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 PRPF39Q86UA1 669 aaKnown RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 DTX1Q86Y01 620 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 CD302Q8IX05 232 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 AADATQ8N5Z0 425 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 C1orf127Q8N9H9 656 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 MYCBPAPQ8TBZ2 947 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 NOC3LQ8WTT2 800 aaKnown RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 KBTBD7Q8WVZ9 684 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 C8orf48Q96LL4 319 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 C5orf34Q96MH7 638 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 NOX5Q96PH1 765 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 NTPCRQ9BSD7 190 aaKnown RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 KLF16Q9BXK1 252 aaPredicted RBP3.4□□□□□ -1.87
CHD1-211ENST00000514344 IKZF4Q9H2S9 585 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 DPEP3Q9H4B8 488 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 ASB7Q9H672 318 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 PRDM8Q9NQV8 689 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 ABCB8Q9NUT2 735 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 GGT7Q9UJ14 662 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 ACSL6Q9UKU0 697 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 CDH9Q9ULB4 789 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 LOXL2Q9Y4K0 774 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 CROCCQ5TZA2 2017 aa3.4□□□□□ -1.87
CHD1-211ENST00000514344 TNRC6AQ8NDV7 1962 aaKnown RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 SCN8AQ9UQD0 1980 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 C9orf172C9J069 976 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 LATO43561 262 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 DUX1O43812 170 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 LZTS3O60299 673 aaPredicted RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 STC2O76061 302 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 IL1BP01584 269 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 CYBBP04839 570 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 SNRPB2P08579 225 aaKnown RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 OR52Z1P0C646 297 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 PLS3P13797 630 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 CDC25AP30304 524 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 CHKAP35790 457 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 CCR5P51681 352 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 CLDN2P57739 230 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 EIF3IQ13347 325 aaKnown RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 KYAT1Q16773 422 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 HAUS3Q68CZ6 603 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 SLC39A4Q6P5W5 647 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 NYAP1Q6ZVC0 841 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 ASB18Q6ZVZ8 466 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 DENND1CQ8IV53 801 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 ZC3H3Q8IXZ2 948 aaKnown RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 UNC5BQ8IZJ1 945 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 RBBP8NLQ8NC74 664 aaPredicted RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 ZNF548Q8NEK5 533 aaPredicted RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 OR13H1Q8NG92 308 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 TPCN2Q8NHX9 752 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 APOBEC4Q8WW27 367 aaKnown RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 GOLGA1Q92805 767 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 JAKMIP2Q96AA8 810 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 JAKMIP1Q96N16 626 aaKnown RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 IL12RB2Q99665 862 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 STRADBQ9C0K7 418 aa3.39□□□□□ -1.87
CHD1-211ENST00000514344 RSPH9Q9H1X1 276 aaPredicted RBP3.39□□□□□ -1.87
CHD1-211ENST00000514344 RWDD1Q9H446 243 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms