RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 KIF19Q2TAC6 998 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 MS4A13Q5J8X5 152 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 ZNF776Q68DI1 518 aaPredicted RBP12.66□□□□□ -0.38
SNHG4-208ENST00000514110 IL27RAQ6UWB1 636 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 LAYNQ6UX15 382 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 GLRX5Q86SX6 157 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 TAC4Q86UU9 113 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 CARNMT1Q8N4J0 409 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 BAHD1Q8TBE0 780 aaPredicted RBP12.66□□□□□ -0.38
SNHG4-208ENST00000514110 SETD7Q8WTS6 366 aaKnown RBP12.66□□□□□ -0.38
SNHG4-208ENST00000514110 ADAMTS14Q8WXS8 1223 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 FAM149B1Q96BN6 582 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 DDX50Q9BQ39 737 aaKnown RBP12.66□□□□□ -0.38
SNHG4-208ENST00000514110 SRRTQ9BXP5 876 aaKnown RBP12.66□□□□□ -0.38
SNHG4-208ENST00000514110 RSPH9Q9H1X1 276 aaPredicted RBP12.66□□□□□ -0.38
SNHG4-208ENST00000514110 TM9SF3Q9HD45 589 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 UBE2TQ9NPD8 197 aaPredicted RBP12.66□□□□□ -0.38
SNHG4-208ENST00000514110 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 CYTH4Q9UIA0 394 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.66□□□□□ -0.38
SNHG4-208ENST00000514110 SNX11Q9Y5W9 270 aa12.66□□□□□ -0.38
SNHG4-208ENST00000514110 PAPSS1O43252 624 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 SIN3BO75182 1162 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 FSBPO95073 299 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 LETM1O95202 739 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 GNA14O95837 355 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 CAPNS1P04632 268 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 CTSOP43234 321 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 PAK1Q13153 545 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 CDH18Q13634 790 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 HNRNPA1L2Q32P51 320 aaKnown RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 TTC31Q49AM3 519 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 DCAF6Q58WW2 860 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 PITRM1Q5JRX3 1037 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 KCNT1Q5JUK3 1230 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 DBX2Q6ZNG2 339 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 DHX40Q8IX18 779 aaKnown RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 LGI2Q8N0V4 545 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 ZNF557Q8N988 423 aaPredicted RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 ORAI3Q9BRQ5 295 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 PABPC3Q9H361 631 aaKnown RBP12.65□□□□□ -0.38
SNHG4-208ENST00000514110 SGK2Q9HBY8 427 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 SERGEFQ9UGK8 458 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 ANKRD6Q9Y2G4 727 aa12.65□□□□□ -0.38
SNHG4-208ENST00000514110 TMEM131Q92545 1883 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 TYW5A2RUC4 315 aaKnown RBP12.64□□□□□ -0.39
SNHG4-208ENST00000514110 TTC34A8MYJ7 566 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 E5RJQ4 531 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 TAF4O00268 1085 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 KCNK3O14649 394 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 SART1O43290 800 aaKnown RBP12.64□□□□□ -0.39
SNHG4-208ENST00000514110 LUC7L3O95232 432 aaKnown RBP12.64□□□□□ -0.39
SNHG4-208ENST00000514110 ASLP04424 464 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 IGHV4-34P06331 123 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 CD27P26842 260 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 ACADSBP45954 432 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 GRIA4P48058 902 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 ST8SIA6P61647 398 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 PITX1P78337 314 aaPredicted RBP12.64□□□□□ -0.39
SNHG4-208ENST00000514110 APBA1Q02410 837 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 TAF5Q15542 800 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 TEAD4Q15561 434 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 C9orf64Q5T6V5 341 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 RAP1GAP2Q684P5 730 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 GJB7Q6PEY0 223 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 BEND5Q7L4P6 421 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 TMEM110Q86TL2 294 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 RHBDD1Q8TEB9 315 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 STK32AQ8WU08 396 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 ZNF606Q8WXB4 792 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 OSGEPQ9NPF4 335 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 TOR4AQ9NXH8 423 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 FBXL12Q9NXK8 326 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 TJP2Q9UDY2 1190 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 ERVW-1Q9UQF0 538 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 APOBEC2Q9Y235 224 aaKnown RBP12.64□□□□□ -0.39
SNHG4-208ENST00000514110 BTBD3Q9Y2F9 522 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 PCDHGB2Q9Y5G2 931 aa12.64□□□□□ -0.39
SNHG4-208ENST00000514110 FAM47DPA6NHR8 397 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 CAPN9O14815 690 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 MID1O15344 667 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 FLRT2O43155 660 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 THAP12O43422 761 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 MED7O43513 233 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 TRUB2O95900 331 aaKnown RBP12.63□□□□□ -0.39
SNHG4-208ENST00000514110 IGLV3-25P01717 112 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 TACR2P21452 398 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 GNA15P30679 374 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 NUMBP49757 651 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 GALCP54803 685 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 SCAPQ12770 1279 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 EIF4EBP2Q13542 120 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-208ENST00000514110 ARID5BQ14865 1188 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 CST6Q15828 149 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 MEA1Q16626 185 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 KIAA0895LQ68EN5 471 aa12.63□□□□□ -0.39
SNHG4-208ENST00000514110 CCNI2Q6ZMN8 369 aaPredicted RBP12.63□□□□□ -0.39
SNHG4-208ENST00000514110 USP30Q70CQ3 517 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms