RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TBC1D3EA0A087X179 549 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3KA0A087X1G2 549 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 KLF18A0A0U1RQI7 1052 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3FA6NER0 549 aaPredicted RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3LB9A6J9 549 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 D6RAR5 112 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 NTN3O00634 580 aaPredicted RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 DUX1O43812 170 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 HUS1O60921 280 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 RNASEH1O60930 286 aaKnown RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3HP0C7X1 549 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 PCSK1P29120 753 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 CCKBRP32239 447 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 CLCN1P35523 988 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 NUDT1P36639 197 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 RNASE9P60153 205 aaKnown RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 PPP2CBP62714 309 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 PPP2CAP67775 309 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 GOLGA8FQ08AF8 430 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 GOLGA8DPQ0D2H9 430 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 STRN3Q13033 797 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 ECM1Q16610 540 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 POM121L1PQ3SYA9 428 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 C14orf28Q4W4Y0 310 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3GQ6DHY5 549 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3CQ6IPX1 549 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 NEK8Q86SG6 692 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3Q8IZP1 549 aaPredicted RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 RBBP8NLQ8NC74 664 aaPredicted RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 OR14C36Q8NHC7 312 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 RUFY2Q8WXA3 655 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 FBXO32Q969P5 355 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 MYLPFQ96A32 169 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 HDAC11Q96DB2 347 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 SLC45A3Q96JT2 553 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 GFM1Q96RP9 751 aaKnown RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 NAP1L4Q99733 375 aaKnown RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 INTS2Q9H0H0 1204 aaKnown RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 RSPH9Q9H1X1 276 aaPredicted RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 CAAP1Q9H8G2 361 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 KMT5AQ9NQR1 393 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 SH3GLB2Q9NR46 395 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 RRN3Q9NYV6 651 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 ARHGAP28Q9P2N2 729 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 DMTF1Q9Y222 760 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 DAAM1Q9Y4D1 1078 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 RBM8AQ9Y5S9 174 aaKnown RBP7.97□□□□□ -1.13
CLDND1-229ENST00000513988 C10orf142B7Z368 130 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 F8VP50 259 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 MID1O15344 667 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 GREM1O60565 184 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 CD2BP2O95400 341 aaKnown RBP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 PENKP01210 267 aaPredicted RBP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 ITGA3P26006 1051 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 ITGB7P26010 798 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 YWHAQP27348 245 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 OAS2P29728 719 aaKnown RBP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 MAT2AP31153 395 aaKnown RBP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 NOS2P35228 1153 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 TUBP50607 506 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 MMP16P51512 607 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 RCAN1P53805 252 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 ADPRHP54922 357 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 PER3P56645 1201 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 HNRNPKP61978 463 aaKnown RBP eCLIP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 CYP27A1Q02318 531 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 KYAT1Q16773 422 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 PRR30Q53SZ7 412 aaPredicted RBP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 C20orf194Q5TEA3 1177 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 TMEM215Q68D42 235 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 CD302Q8IX05 232 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 TMEM86AQ8N2M4 240 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 OR6B3Q8NGW1 331 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 CYB5D2Q8WUJ1 264 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 OVCA2Q8WZ82 227 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 GLMNQ92990 594 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 TMEM159Q96B96 161 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 ZNF775Q96BV0 537 aaPredicted RBP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 ZNF560Q96MR9 790 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 HAPLN3Q96S86 360 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 CALN1Q9BXU9 219 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 LNPKQ9C0E8 428 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 CDH19Q9H159 772 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 DNAJC28Q9NX36 388 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 SUN2Q9UH99 717 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 SALL4Q9UJQ4 1053 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 L1RE1Q9UN81 338 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 CA5BQ9Y2D0 317 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 RBM19Q9Y4C8 960 aaKnown RBP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 KCTD3Q9Y597 815 aa7.96□□□□□ -1.14
CLDND1-229ENST00000513988 NSD1Q96L73 2696 aaPredicted RBP7.96□□□□□ -1.14
CLDND1-229ENST00000513988 KIAA1324LA8MWY0 1029 aaPredicted RBP7.95□□□□□ -1.14
CLDND1-229ENST00000513988 PRAMEF26H0Y7S4 382 aa7.95□□□□□ -1.14
CLDND1-229ENST00000513988 M0R2N6 131 aa7.95□□□□□ -1.14
CLDND1-229ENST00000513988 HCRTO43612 131 aa7.95□□□□□ -1.14
CLDND1-229ENST00000513988 SORBS2O94875 1100 aaKnown RBP7.95□□□□□ -1.14
CLDND1-229ENST00000513988 SPATA31C1P0DKV0 1188 aa7.95□□□□□ -1.14
CLDND1-229ENST00000513988 CAPN3P20807 821 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms