RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-210	ENST00000513153	PCDHB7	Q9Y5E2	793 aa		4.22	□□□□□ -1.73
LINC01088-210	ENST00000513153	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	CNTN5	O94779	1100 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	KAT7	O95251	611 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	TGM2	P21980	687 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	SLC37A1	P57057	533 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	IFIT5	Q13325	482 aa	Known RBP	4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	CSHL1	Q14406	222 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	KIAA1755	Q5JYT7	1200 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	WASHC2D	Q5SRD0	308 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	TTC39A	Q5SRH9	613 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	C9orf50	Q5SZB4	431 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	MSANTD2	Q6P1R3	559 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	WDR93	Q6P2C0	686 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	SLC39A5	Q6ZMH5	540 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	FMNL3	Q8IVF7	1028 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	ANKRD13A	Q8IZ07	590 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	INPP5D	Q92835	1189 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	PAAF1	Q9BRP4	392 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	KCNK9	Q9NPC2	374 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	HIF1AN	Q9NWT6	349 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	CA14	Q9ULX7	337 aa		4.21	□□□□□ -1.74
LINC01088-210	ENST00000513153	LMTK3	Q96Q04	1460 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	PNMA6E	A0A0J9YXQ4	647 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	LOC105371045	A0A1W2PR82	267 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	GXYLT2	A0PJZ3	443 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153		J3KTA2	159 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	MDM4	O15151	490 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	TAF5L	O75529	589 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	NFATC1	O95644	943 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	IGKV3-20	P01619	116 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	ITGA5	P08648	1049 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	HOXA11	P31270	313 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	LTB	Q06643	244 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	COBLL1	Q53SF7	1204 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	HMBOX1	Q6NT76	420 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	SLC22A17	Q8WUG5	538 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	NUDCD2	Q8WVJ2	157 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	BRI3BP	Q8WY22	251 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	FAR2	Q96K12	515 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	LMLN	Q96KR4	655 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	ISCU	Q9H1K1	167 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	SFXN1	Q9H9B4	322 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	FSCN3	Q9NQT6	498 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	HELLS	Q9NRZ9	838 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	PLK2	Q9NYY3	685 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	FAM50B	Q9Y247	325 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	DTNA	Q9Y4J8	743 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	CKAP5	Q14008	2032 aa		4.2	□□□□□ -1.74
LINC01088-210	ENST00000513153	FAM234B	A2RU67	622 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	FOXO6	A8MYZ6	492 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	HARS	P12081	509 aa	Known RBP	4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	RFX2	P48378	723 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	CYB5R4	Q7L1T6	521 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	DPP9	Q86TI2	863 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	RBM23	Q86U06	439 aa	Known RBP	4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	EXD3	Q8N9H8	876 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	ADPRHL1	Q8NDY3	354 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	NEUROG1	Q92886	237 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	ATP2A3	Q93084	1043 aa		4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
LINC01088-210	ENST00000513153	GAGE12J	A6NER3	117 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	ACOT8	O14734	319 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	NKX2-8	O15522	239 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	FGF18	O76093	207 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	NTSR2	O95665	410 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	KLKB1	P03952	638 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	SHC2	P98077	582 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	EGR4	Q05215	589 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	FAM209B	Q5JX69	171 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153		Q5PR19	223 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	PARM1	Q6UWI2	310 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	TRIL	Q7L0X0	811 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	GPSM1	Q86YR5	675 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	KAT2A	Q92830	837 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	MED30	Q96HR3	178 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	SARG	Q9BW04	601 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	MAP6D1	Q9H9H5	199 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	WNT16	Q9UBV4	365 aa		4.18	□□□□□ -1.74
LINC01088-210	ENST00000513153	OBSCN	Q5VST9	7968 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	HNRNPDL	O14979	420 aa	Known RBP	4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	HOXC6	P09630	235 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	IGFBP2	P18065	325 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	RASSF2	P50749	326 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	PMS2P11	Q13670	270 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	KEAP1	Q14145	624 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	NFATC4	Q14934	902 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	SAFB	Q15424	915 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	AAK1	Q2M2I8	961 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	SLC4A8	Q2Y0W8	1093 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	C10orf76	Q5T2E6	689 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	TMEM88	Q6PEY1	159 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	FBXO38	Q6PIJ6	1188 aa		4.17	□□□□□ -1.74
LINC01088-210	ENST00000513153	ADGRF3	Q8IZF5	1079 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms