RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 PTPN13Q12923 2485 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 NYNRINQ9P2P1 1898 aaKnown RBP12.91□□□□□ -0.34
SDHA-215ENST00000512962 TEX51A0A1B0GUA7 166 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 E9PAM4 449 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 PCDHGA12O60330 932 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 BRINP1O60477 761 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 BEST1O76090 585 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 CST3P01034 146 aaPredicted RBP12.91□□□□□ -0.34
SDHA-215ENST00000512962 ACO1P21399 889 aaKnown RBP12.91□□□□□ -0.34
SDHA-215ENST00000512962 ADH7P40394 386 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 CTSKP43235 329 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 CCT8P50990 548 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 MFAP3P55082 362 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 LY6DQ14210 128 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 RTP5Q14D33 572 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 MAPRE1Q15691 268 aaKnown RBP12.91□□□□□ -0.34
SDHA-215ENST00000512962 PERM1Q5SV97 790 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 HES3Q5TGS1 186 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 CEP135Q66GS9 1140 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 HTR3DQ70Z44 454 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 ERICH1Q86X53 443 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 CBWD2Q8IUF1 395 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 SPACA3Q8IXA5 215 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 CACTINQ8WUQ7 758 aaKnown RBP12.91□□□□□ -0.34
SDHA-215ENST00000512962 PLD4Q96BZ4 506 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 MMS19Q96T76 1030 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
SDHA-215ENST00000512962 ELOVL4Q9GZR5 314 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 MUC3BQ9H195 1237 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 EHD2Q9NZN4 543 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 THAP10Q9P2Z0 257 aaPredicted RBP12.91□□□□□ -0.34
SDHA-215ENST00000512962 NXF1Q9UBU9 619 aaKnown RBP12.91□□□□□ -0.34
SDHA-215ENST00000512962 FTSJ1Q9UET6 329 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 FBXO10Q9UK96 956 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 NUDT5Q9UKK9 219 aa12.91□□□□□ -0.34
SDHA-215ENST00000512962 FAM92AA1XBS5 289 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 TLR5O60602 858 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 SMNDC1O75940 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
SDHA-215ENST00000512962 ADH6P28332 368 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 GNL1P36915 607 aaPredicted RBP12.9□□□□□ -0.34
SDHA-215ENST00000512962 ACADVLP49748 655 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 TUBP50607 506 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 AFF3P51826 1226 aaKnown RBP12.9□□□□□ -0.34
SDHA-215ENST00000512962 ZNF234Q14588 700 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 L1TD1Q5T7N2 865 aaKnown RBP12.9□□□□□ -0.34
SDHA-215ENST00000512962 TMEM215Q68D42 235 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 FBXL19Q6PCT2 694 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 ADAMTSL4Q6UY14 1074 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 GPRIN1Q7Z2K8 1008 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 ZNF366Q8N895 744 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 PDZD8Q8NEN9 1154 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 OR6B3Q8NGW1 331 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 OVCA2Q8WZ82 227 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 LARP4BQ92615 738 aaKnown RBP12.9□□□□□ -0.34
SDHA-215ENST00000512962 IGSF8Q969P0 613 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 BIRC7Q96CA5 298 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 HVCN1Q96D96 273 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 XPO6Q96QU8 1125 aaKnown RBP12.9□□□□□ -0.34
SDHA-215ENST00000512962 HNRNPABQ99729 332 aaKnown RBP12.9□□□□□ -0.34
SDHA-215ENST00000512962 MDFIQ99750 246 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 CEP44Q9C0F1 390 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 CLMPQ9H6B4 373 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 CPNE5Q9HCH3 593 aa12.9□□□□□ -0.34
SDHA-215ENST00000512962 COL27A1Q8IZC6 1860 aaPredicted RBP12.89□□□□□ -0.35
SDHA-215ENST00000512962 COL12A1Q99715 3063 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 ADARB2-AS1A8MUL3 147 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 ENC1O14682 589 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 KLKB1P03952 638 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 WNT1P04628 370 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 JUPP14923 745 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 SRSF1Q07955 248 aaKnown RBP eCLIP12.89□□□□□ -0.35
SDHA-215ENST00000512962 PWP1Q13610 501 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 STARD3Q14849 445 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 POSTNQ15063 836 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 PREPLQ4J6C6 727 aaPredicted RBP12.89□□□□□ -0.35
SDHA-215ENST00000512962 RPS26P11Q5JNZ5 115 aaPredicted RBP12.89□□□□□ -0.35
SDHA-215ENST00000512962 FYB2Q5VWT5 728 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 RELL1Q8IUW5 271 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 FAM184AQ8NB25 1140 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 B3GALNT2Q8NCR0 500 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 PRCCQ92733 491 aaPredicted RBP12.89□□□□□ -0.35
SDHA-215ENST00000512962 DNAJC19Q96DA6 116 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
SDHA-215ENST00000512962 NMUR1Q9HB89 426 aa12.89□□□□□ -0.35
SDHA-215ENST00000512962 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 A0A1B0GTQ1 180 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 CAPN9O14815 690 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 WNT9AO14904 365 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 RRP8O43159 456 aaKnown RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 PAPSS1O43252 624 aaPredicted RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 TACC1O75410 805 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 RFPL3O75679 317 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 RTN3O95197 1032 aaPredicted RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 GARTP22102 1010 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 CDH8P55286 799 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
SDHA-215ENST00000512962 FUKQ8N0W3 1084 aa12.88□□□□□ -0.35
SDHA-215ENST00000512962 UBXN4Q92575 508 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms