RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 SMG5Q9UPR3 1016 aaKnown RBP9.82□□□□□ -0.84
MSH3-203ENST00000512531 RRP15Q9Y3B9 282 aaKnown RBP9.82□□□□□ -0.84
MSH3-203ENST00000512531 USP34Q70CQ2 3546 aa9.82□□□□□ -0.84
MSH3-203ENST00000512531 SMIM28A0A1B0GU29 152 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 C2orf71A6NGG8 1288 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 HIDE1A8MVS5 230 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 E5RJQ4 531 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 PIRO00625 290 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 XPO1O14980 1071 aaKnown RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 TRAPPC3O43617 180 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 CSDE1O75534 798 aaKnown RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 ZBED1O96006 694 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 GSTA2P09210 222 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 FGFR1P11362 822 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 HOXA11P31270 313 aaPredicted RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 NBL1P41271 181 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 CLCN5P51795 746 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 BCAR1P56945 870 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 IL9RQ01113 521 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 RNASELQ05823 741 aaKnown RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 ZNF252P-AS1Q0IIN9 211 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 XRCC4Q13426 336 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 LLGL1Q15334 1064 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 OASLQ15646 514 aaKnown RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 XKR4Q5GH76 650 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 LLGL2Q6P1M3 1020 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ALKAL1Q6UXT8 129 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 CCDC121Q6ZUS5 278 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 FAM183BPQ6ZVS7 135 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 SLC26A9Q7LBE3 791 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 STRADAQ7RTN6 431 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ANKS1BQ7Z6G8 1248 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 TADA2BQ86TJ2 420 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ACOT1Q86TX2 421 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ZNF598Q86UK7 904 aaKnown RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 TDRPQ86YL5 185 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 CCDC13Q8IYE1 715 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ALDH16A1Q8IZ83 802 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ADGRF2Q8IZF7 708 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 SIX6OS1Q8N1H7 587 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 SLC39A11Q8N1S5 342 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 KREMEN2Q8NCW0 462 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 JOSD2Q8TAC2 188 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 CXorf38Q8TB03 319 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 MYCBPAPQ8TBZ2 947 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ACTL9Q8TC94 416 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ZNF473Q8WTR7 871 aaKnown RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 RAPGEF5Q92565 580 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 EDEM1Q92611 657 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ATOH1Q92858 354 aaPredicted RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 GRAMD1AQ96CP6 724 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 CABS1Q96KC9 395 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 XPO6Q96QU8 1125 aaKnown RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 SMC6Q96SB8 1091 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 ACTR5Q9H9F9 607 aaPredicted RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 VPS37BQ9H9H4 285 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 LRRC4Q9HBW1 653 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 KCNK9Q9NPC2 374 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 KLHL11Q9NVR0 708 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.81□□□□□ -0.84
MSH3-203ENST00000512531 NINJ2Q9NZG7 142 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 PCSK1NQ9UHG2 260 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 LGALS13Q9UHV8 139 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 SLC12A6Q9UHW9 1150 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 DSEQ9UL01 958 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 R3HDM2Q9Y2K5 976 aaKnown RBP9.81□□□□□ -0.84
MSH3-203ENST00000512531 GIT1Q9Y2X7 761 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 MYO10Q9HD67 2058 aa9.81□□□□□ -0.84
MSH3-203ENST00000512531 HACD1B0YJ81 288 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 H0YHG0 523 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 H3BRJ5 948 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 ALOX15BO15296 676 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 CHADO15335 359 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 CLASP2O75122 1294 aaKnown RBP9.8□□□□□ -0.84
MSH3-203ENST00000512531 GJB6O95452 261 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 PDGFAP04085 211 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 THP07101 528 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 ADH1AP07327 375 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 RBP3P10745 1247 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 CHN1P15882 459 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 IVDP26440 423 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 PCSK1P29120 753 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 LRPAP1P30533 357 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 STX2P32856 288 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 NOS2P35228 1153 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 ALDH7A1P49419 539 aaKnown RBP9.8□□□□□ -0.84
MSH3-203ENST00000512531 SLC18A1P54219 525 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 DYNLT1P63172 113 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 OGDHQ02218 1023 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 AUHQ13825 339 aaKnown RBP9.8□□□□□ -0.84
MSH3-203ENST00000512531 MAPRE1Q15691 268 aaKnown RBP9.8□□□□□ -0.84
MSH3-203ENST00000512531 KYNUQ16719 465 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 SMTNL2Q2TAL5 461 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 ARL13BQ3SXY8 428 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 ERMARDQ5T6L9 678 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 KIAA1841Q6NSI8 718 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 CPNE8Q86YQ8 564 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 CCDC197Q8NCU1 140 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 FAM172AQ8WUF8 416 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 SLC35F5Q8WV83 523 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms