RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 PRICKLE2Q7Z3G6 844 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 MMAAQ8IVH4 418 aaKnown RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 ARHGAP18Q8N392 663 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 TAF4BQ92750 862 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 MED8Q96G25 268 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 OMDQ99983 421 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 CGNQ9P2M7 1197 aaKnown RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
DDR1-267ENST00000512336 FZD4Q9ULV1 537 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 TEX15Q9BXT5 2789 aa12.7□□□□□ -0.38
DDR1-267ENST00000512336 FLNCQ14315 2725 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 DXOO77932 396 aaKnown RBP12.69□□□□□ -0.38
DDR1-267ENST00000512336 HLA-DRAP01903 254 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 SLC8A1P32418 973 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 CSRP3P50461 194 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 ADPRHP54922 357 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 ST8SIA6P61647 398 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 PPP2CBP62714 309 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 PPP2CAP67775 309 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 DAB2P98082 770 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 SFSWAPQ12872 951 aaKnown RBP12.69□□□□□ -0.38
DDR1-267ENST00000512336 E2F4Q16254 413 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 HNRNPA1L2Q32P51 320 aaKnown RBP12.69□□□□□ -0.38
DDR1-267ENST00000512336 KIAA1614Q5VZ46 1190 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 SV2AQ7L0J3 742 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 LSMEM2Q8N112 164 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 AADATQ8N5Z0 425 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 SNRNP27Q8WVK2 155 aaKnown RBP12.69□□□□□ -0.38
DDR1-267ENST00000512336 NDRG1Q92597 394 aaKnown RBP12.69□□□□□ -0.38
DDR1-267ENST00000512336 TRIM4Q9C037 500 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 APOBEC3GQ9HC16 384 aaKnown RBP12.69□□□□□ -0.38
DDR1-267ENST00000512336 SLC39A2Q9NP94 309 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 STOML2Q9UJZ1 356 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 MTMR6Q9Y217 621 aa12.69□□□□□ -0.38
DDR1-267ENST00000512336 ARID1BQ8NFD5 2236 aaPredicted RBP12.68□□□□□ -0.38
DDR1-267ENST00000512336 TBL1XO60907 577 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 USP12O75317 370 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 CASP1P29466 404 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 PSMD8P48556 350 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 ERVPABLB-1P60509 514 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 UBE2HP62256 183 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 KRT85P78386 507 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 AMPD3Q01432 767 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 KNOP1Q1ED39 458 aaKnown RBP12.68□□□□□ -0.38
DDR1-267ENST00000512336 ZNF394Q53GI3 561 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 RAB41Q5JT25 222 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 ADGRF1Q5T601 910 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 C9orf64Q5T6V5 341 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 CDCP2Q5VXM1 449 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 ATL3Q6DD88 541 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 NAPEPLDQ6IQ20 393 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 CNNM4Q6P4Q7 775 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 UNC13DQ70J99 1090 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 SND1Q7KZF4 910 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDR1-267ENST00000512336 BHLHA9Q7RTU4 235 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 PIGZQ86VD9 579 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 MFSD2AQ8NA29 543 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 OR14C36Q8NHC7 312 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 DHX58Q96C10 678 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 VCPIP1Q96JH7 1222 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 MRGPRX3Q96LB0 322 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 DPH1Q9BZG8 443 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 ULBP1Q9BZM6 244 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 SCAND2PQ9GZW5 306 aaPredicted RBP12.68□□□□□ -0.38
DDR1-267ENST00000512336 POLR1BQ9H9Y6 1135 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 CYP3A43Q9HB55 503 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 ASCL3Q9NQ33 180 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 SFMBT1Q9UHJ3 866 aa12.68□□□□□ -0.38
DDR1-267ENST00000512336 HBS1LQ9Y450 684 aaKnown RBP12.68□□□□□ -0.38
DDR1-267ENST00000512336 MSI1O43347 362 aaKnown RBP12.67□□□□□ -0.38
DDR1-267ENST00000512336 LATO43561 262 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 OPA1O60313 960 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 CSO75390 466 aaKnown RBP12.67□□□□□ -0.38
DDR1-267ENST00000512336 LATS1O95835 1130 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 GOT1P17174 413 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 CSKP41240 450 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 LSSP48449 732 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 ZNF211Q13398 564 aaPredicted RBP12.67□□□□□ -0.38
DDR1-267ENST00000512336 C1orf220Q5T0J3 134 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 RFWD3Q6PCD5 774 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 TMC6Q7Z403 805 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 SLC25A45Q8N413 288 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 EDEM1Q92611 657 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 TTC17Q96AE7 1141 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 LMLNQ96KR4 655 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 DEPDC7Q96QD5 511 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 USP28Q96RU2 1077 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 CUEDC2Q9H467 287 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 OLA1Q9NTK5 396 aaKnown RBP12.67□□□□□ -0.38
DDR1-267ENST00000512336 DMAC2Q9NW81 257 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 STIM2Q9P246 746 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 IL17BQ9UHF5 180 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 INTS6Q9UL03 887 aaKnown RBP12.67□□□□□ -0.38
DDR1-267ENST00000512336 BSNQ9UPA5 3926 aa12.67□□□□□ -0.38
DDR1-267ENST00000512336 TBC1D3DA0A087WVF3 549 aa12.66□□□□□ -0.38
DDR1-267ENST00000512336 TBC1D3IA0A087WXS9 549 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms