RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	RGS10	O43665	173 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	ONECUT2	O95948	504 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	LMNA	P02545	664 aa	Known RBP	6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	FES	P07332	822 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	UQCRFS1P1	P0C7P4	283 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	JUP	P14923	745 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	KCNAB1	Q14722	419 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	TTC39A	Q5SRH9	613 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	IZUMO3	Q5VZ72	239 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	RRAGB	Q5VZM2	374 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	CST9	Q5W186	159 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	SLC9A4	Q6AI14	798 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	BEND5	Q7L4P6	421 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	ZNF551	Q7Z340	670 aa	Predicted RBP	6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	AACS	Q86V21	672 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	DZIP1	Q86YF9	867 aa	Known RBP	6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	FAM186B	Q8IYM0	893 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	SPATA5	Q8NB90	893 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	DEPTOR	Q8TB45	409 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	SMCR8	Q8TEV9	937 aa	Predicted RBP	6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	R3HDM4	Q96D70	268 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	KIF1BP	Q96EK5	621 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	PRMT6	Q96LA8	375 aa	Predicted RBP	6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	GDF15	Q99988	308 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	C17orf80	Q9BSJ5	609 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	KRTAP4-11	Q9BYQ6	195 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	VEZT	Q9HBM0	779 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	IL1RAPL2	Q9NP60	686 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	ARHGEF3	Q9NR81	526 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	SERTAD4	Q9NUC0	356 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	HMG20B	Q9P0W2	317 aa		6.1	□□□□□ -1.43
MATR3-218	ENST00000511978	POLR2A	P24928	1970 aa	Known RBP	6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	OTOF	Q9HC10	1997 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	MYH2	Q9UKX2	1941 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	ORC4	O43929	436 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	VNN1	O95497	513 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	HARS	P12081	509 aa	Known RBP	6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	SERPINB3	P29508	390 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	PRKAR1B	P31321	381 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	UQCRC1	P31930	480 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	TIAL1	Q01085	375 aa	Known RBP eCLIP	6.09	□□□□□ -1.43	3e-6	■■■■□ 25.8
MATR3-218	ENST00000511978	ARL13B	Q3SXY8	428 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	PLAC9	Q5JTB6	97 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	CCDC158	Q5M9N0	1113 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	SIMC1	Q8NDZ2	872 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	TDRD3	Q9H7E2	651 aa	Known RBP	6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	NLRC4	Q9NPP4	1024 aa		6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	HEYL	Q9NQ87	328 aa	Predicted RBP	6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	ZNF70	Q9UC06	446 aa	Predicted RBP	6.09	□□□□□ -1.43
MATR3-218	ENST00000511978	CEP350	Q5VT06	3117 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	RFX7	Q2KHR2	1363 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	GAK	O14976	1311 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	TTLL1	O95922	423 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	MYL4	P12829	197 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	HGF	P14210	728 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	EPHA3	P29320	983 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	NF2	P35240	595 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	HTR3A	P46098	478 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	ALDH9A1	P49189	494 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	HMGA2	P52926	109 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	CACNA2D1	P54289	1103 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	HUNK	P57058	714 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	STK3	Q13188	491 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	TNFAIP1	Q13829	316 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	SLC35G1	Q2M3R5	365 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	ERCC6L	Q2NKX8	1250 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	MANEAL	Q5VSG8	457 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	APOBEC3H	Q6NTF7	200 aa	Known RBP	6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	XRRA1	Q6P2D8	792 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	CLASRP	Q8N2M8	674 aa	Known RBP	6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	LRRC46	Q96FV0	321 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	ZBTB45	Q96K62	511 aa	Predicted RBP	6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	LRRCC1	Q9C099	1032 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	DEFB129	Q9H1M3	183 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	CERS4	Q9HA82	394 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	TMOD2	Q9NZR1	351 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	RAI14	Q9P0K7	980 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	GABRQ	Q9UN88	632 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	ENTPD2	Q9Y5L3	495 aa		6.08	□□□□□ -1.44
MATR3-218	ENST00000511978	MYO5A	Q9Y4I1	1855 aa	Known RBP	6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	MROH7-TTC4	A0A0A0MT08	1334 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	FOCAD	Q5VW36	1801 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	TCP10L2	B9ZVM9	353 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	AGPS	O00116	658 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	BTD	P43251	543 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	CLK3	P49761	638 aa	Known RBP	6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	TIRAP	P58753	221 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	FKBP1B	P68106	108 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	MECOM	Q03112	1051 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	GRM1	Q13255	1194 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	DEFB115	Q30KQ5	88 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	DGKK	Q5KSL6	1271 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	CDC42EP5	Q6NZY7	148 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	TOGARAM2	Q6ZUX3	1019 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	GRASP	Q7Z6J2	395 aa	Predicted RBP	6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	CAND1	Q86VP6	1230 aa	Known RBP	6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	SAMD3	Q8N6K7	520 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	FANCB	Q8NB91	859 aa		6.07	□□□□□ -1.44
MATR3-218	ENST00000511978	CAGE1	Q8TC20	777 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms