RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ZNF845Q96IR2 970 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC11-207ENST00000511409 TBATAQ96M53 351 aa3.8□□□□□ -1.8
TRAPPC11-207ENST00000511409 EFHD1Q9BUP0 239 aa3.8□□□□□ -1.8
TRAPPC11-207ENST00000511409 HTATIP2Q9BUP3 242 aa3.8□□□□□ -1.8
TRAPPC11-207ENST00000511409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.8□□□□□ -1.8
TRAPPC11-207ENST00000511409 GGA3Q9NZ52 723 aa3.8□□□□□ -1.8
TRAPPC11-207ENST00000511409 IFT80Q9P2H3 777 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC11-207ENST00000511409 DNAJC16Q9Y2G8 782 aa3.8□□□□□ -1.8
TRAPPC11-207ENST00000511409 CYP3A7-CYP3A51PA0A087WV96 503 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 C16orf96A6NNT2 1141 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 KLK10O43240 276 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 ANP32CO43423 234 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 CSF1P09603 554 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 CYP2A6P11509 494 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 CYP3A7P24462 503 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 TACR3P29371 465 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 B4GALNT1Q00973 533 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 POU5F1BQ06416 359 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 MTA1Q13330 715 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 TRPC3Q13507 836 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 ALKBH1Q13686 389 aaKnown RBP3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 EFR3AQ14156 821 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 PROSER3Q2NL68 480 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 LVRNQ6Q4G3 990 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 RD3Q7Z3Z2 195 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 VPS52Q8N1B4 723 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 C5orf34Q96MH7 638 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 TWNKQ96RR1 684 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 TRIM31Q9BZY9 425 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 ARHGAP39Q9C0H5 1083 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 RASSF1Q9NS23 344 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 SEMA5BQ9P283 1151 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 SUFUQ9UMX1 484 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 SLC8A2Q9UPR5 921 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 CRYL1Q9Y2S2 319 aa3.79□□□□□ -1.8
TRAPPC11-207ENST00000511409 COL11A2P13942 1736 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 MANSC4A6NHS7 340 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 SAC3D1A6NKF1 404 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 TISP43B9A030 160 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 PRRT4C9JH25 899 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 PEX12O00623 359 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 SYN3O14994 580 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 INPPL1O15357 1258 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 TSPAN3O60637 253 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 WDHD1O75717 1129 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 C1QL1O75973 258 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 CNTN5O94779 1100 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 ACP5P13686 325 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 AKR1A1P14550 325 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 ST6GAL1P15907 406 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 TGM2P21980 687 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 SFPQP23246 707 aaKnown RBP eCLIP3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 PNPLA4P41247 253 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 ZNF84P51523 738 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 GOLGA8FQ08AF8 430 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 DMWDQ09019 674 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 ZNF268Q14587 947 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 SLC4A8Q2Y0W8 1093 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 JAKMIP3Q5VZ66 844 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 ATG16L1Q676U5 607 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 MIS18BP1Q6P0N0 1132 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 ZNF788Q6ZQV5 615 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 TFAP2DQ7Z6R9 452 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 PRIMA1Q86XR5 153 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 RHPN2Q8IUC4 686 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 ADGRF3Q8IZF5 1079 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 ESX1Q8N693 406 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 OSR1Q8TAX0 266 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 HERVK_113Q902F9 699 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 KAT2BQ92831 832 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 NELL1Q92832 810 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 PPP1R10Q96QC0 940 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 REEP2Q9BRK0 252 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 HERC2P3Q9BVR0 1158 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 HDHD5Q9BXW7 423 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 R3HDMLQ9H3Y0 253 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 MTMR4Q9NYA4 1195 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 PI4KBQ9UBF8 816 aa3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 IPO11Q9UI26 975 aaKnown RBP3.78□□□□□ -1.8
TRAPPC11-207ENST00000511409 PCSK5Q92824 1860 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 AOX1Q06278 1338 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 EMSYQ7Z589 1322 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 VWA3AA6NCI4 1184 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 NPIPB13A6NJU9 1138 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 NPIPB5A8MRT5 1133 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 NPIPB4C9JG80 1138 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 RRHO14718 337 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 DSCR3O14972 297 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 CCNT1O60563 726 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 PROP1O75360 226 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 CNPP09543 421 aaKnown RBP3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 WEE2P0C1S8 567 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 RFPL3SP0C7P2 107 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 LYL1P12980 280 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 TNNT1P13805 278 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 IGFBP2P18065 325 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 GSTM2P28161 218 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 IDUAP35475 653 aa3.77□□□□□ -1.81
TRAPPC11-207ENST00000511409 YPEL5P62699 121 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms