RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 SYNJ2BP-COX16A0A087WUM0 186 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 PES1O00541 588 aaKnown RBP18.55■□□□□ 0.56
TPM3-220ENST00000509601 NOS2P35228 1153 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 RPS14P62263 151 aaKnown RBP18.55■□□□□ 0.56
TPM3-220ENST00000509601 KRT31Q15323 416 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 CADM4Q8NFZ8 388 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 FOXJ1Q92949 421 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 NUP58Q9BVL2 599 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 FAM204AQ9H8W3 233 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 FANCLQ9NW38 375 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 DDIT4Q9NX09 232 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 COX16Q9P0S2 106 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 KIAA1522Q9P206 1035 aaPredicted RBP18.55■□□□□ 0.56
TPM3-220ENST00000509601 SLC12A6Q9UHW9 1150 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 CACNA1EQ15878 2313 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 KNL1Q8NG31 2342 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 ADAMTS9Q9P2N4 1935 aa18.55■□□□□ 0.56
TPM3-220ENST00000509601 TYW5A2RUC4 315 aaKnown RBP18.54■□□□□ 0.56
TPM3-220ENST00000509601 METTL12A8MUP2 240 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 H0Y626 953 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 GIPC1O14908 333 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 CFIP05156 583 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 SLC2A3P11169 496 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 ACADMP11310 421 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 CCR1P32246 355 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 CTSOP43234 321 aaPredicted RBP18.54■□□□□ 0.56
TPM3-220ENST00000509601 KLK7P49862 253 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 SNX16P57768 344 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 PITRM1Q5JRX3 1037 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 OTUD1Q5VV17 481 aaPredicted RBP18.54■□□□□ 0.56
TPM3-220ENST00000509601 FBXL22Q6P050 247 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 NOP9Q86U38 636 aaKnown RBP18.54■□□□□ 0.56
TPM3-220ENST00000509601 CHSY1Q86X52 802 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 CACUL1Q86Y37 369 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 RGL4Q8IZJ4 473 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 APCDD1Q8J025 514 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 TMEM35BQ8NCS4 154 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 GANQ9H2C0 597 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 ERVW-1Q9UQF0 538 aa18.54■□□□□ 0.56
TPM3-220ENST00000509601 MUC22E2RYF6 1773 aaPredicted RBP18.54■□□□□ 0.56
TPM3-220ENST00000509601 F5H5T6 163 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 ACACBO00763 2458 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 DAB1O75553 588 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 ASLP04424 464 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 TFE3P19532 575 aaPredicted RBP18.53■□□□□ 0.56
TPM3-220ENST00000509601 ABCB4P21439 1286 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 KCNA4P22459 653 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 MATKP42679 507 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 MAPK8P45983 427 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 GFPT1Q06210 699 aaPredicted RBP18.53■□□□□ 0.56
TPM3-220ENST00000509601 CDH18Q13634 790 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 UAP1L1Q3KQV9 507 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 WDR45BQ5MNZ6 344 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 SYCP2LQ5T4T6 812 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 TAF3Q5VWG9 929 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 RABEPKQ7Z6M1 372 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 ZDHHC17Q8IUH5 632 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 KDM1BQ8NB78 822 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 C1orf216Q8TAB5 229 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 RNF34Q969K3 372 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 IGSF8Q969P0 613 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 NT5C3BQ969T7 300 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 C18orf8Q96DM3 657 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 NPY6RQ99463 290 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 ANLNQ9NQW6 1124 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 SLCO3A1Q9UIG8 710 aa18.53■□□□□ 0.56
TPM3-220ENST00000509601 PCDH15Q96QU1 1955 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 F8VZ95 297 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 I6L893 689 aaPredicted RBP18.52■□□□□ 0.56
TPM3-220ENST00000509601 M0QYT0 321 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 ARHGAP33O14559 1287 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 EPHB6O15197 1021 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 CSRP1P21291 193 aaKnown RBP18.52■□□□□ 0.56
TPM3-220ENST00000509601 ACSL1P33121 698 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 PLK1P53350 603 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 NME3Q13232 169 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 AUHQ13825 339 aaKnown RBP18.52■□□□□ 0.56
TPM3-220ENST00000509601 ARID5BQ14865 1188 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 HNRNPA1L2Q32P51 320 aaKnown RBP18.52■□□□□ 0.56
TPM3-220ENST00000509601 PLEKHG6Q3KR16 790 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 C9orf64Q5T6V5 341 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 SH3PXD2AQ5TCZ1 1133 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 DCAF12L1Q5VU92 463 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 PSAPL1Q6NUJ1 521 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 C14orf80Q86SX3 495 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 FAM124AQ86V42 546 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 ERICH1Q86X53 443 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 CIR1Q86X95 450 aaPredicted RBP18.52■□□□□ 0.56
TPM3-220ENST00000509601 XYLT1Q86Y38 959 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 CCDC117Q8IWD4 279 aaPredicted RBP18.52■□□□□ 0.56
TPM3-220ENST00000509601 CCAR2Q8N163 923 aaKnown RBP18.52■□□□□ 0.56
TPM3-220ENST00000509601 ALG14Q96F25 216 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 RSPH9Q9H1X1 276 aaPredicted RBP18.52■□□□□ 0.56
TPM3-220ENST00000509601 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 SYNCQ9H7C4 482 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 FBRSQ9HAH7 460 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 CEP83Q9Y592 693 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 HS3ST4Q9Y661 456 aa18.52■□□□□ 0.56
TPM3-220ENST00000509601 FAM170AA1A519 330 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms