RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 SLC11A2P49281 568 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 HARS2P49590 506 aaKnown RBP12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 KCNQ1P51787 676 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 AUHQ13825 339 aaKnown RBP12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 RAP1GAP2Q684P5 730 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 RTL10Q7L3V2 364 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 C14orf80Q86SX3 495 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 CHSY1Q86X52 802 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 TMC8Q8IU68 726 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 MREGQ8N565 214 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 NETO2Q8NC67 525 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 CCNYQ8ND76 341 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 SLC22A17Q8WUG5 538 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 LRRN4Q8WUT4 740 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 MRPS31Q92665 395 aaKnown RBP12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 LGMNQ99538 433 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 PRDM12Q9H4Q4 367 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 MAN1C1Q9NR34 630 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 ASAH2Q9NR71 780 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 PAK5Q9P286 719 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 MSRAQ9UJ68 235 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 VANGL2Q9ULK5 521 aa12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 TPX2Q9ULW0 747 aaKnown RBP12.98□□□□□ -0.33
LYSMD3-204ENST00000509384 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 CLASP2O75122 1294 aaKnown RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 STK10O94804 968 aaKnown RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 MBL2P11226 248 aaPredicted RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 VAV1P15498 845 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 CDC25CP30307 473 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 HSPA9P38646 679 aaKnown RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 NRLP54845 237 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 AP1B1Q10567 949 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 PRKD1Q15139 912 aaPredicted RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 HIBCHQ6NVY1 386 aaPredicted RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 RHBDF2Q6PJF5 856 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 TMC3Q7Z5M5 1100 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 PCGF5Q86SE9 256 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 HS6ST3Q8IZP7 471 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 LZTR1Q8N653 840 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 RTL3Q8N8U3 475 aaKnown RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 HTR3CQ8WXA8 447 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 PKNOX2Q96KN3 472 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 CORO1BQ9BR76 489 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 PBX4Q9BYU1 374 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 NKX2-4Q9H2Z4 354 aa12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 PPARGC1AQ9UBK2 798 aaKnown RBP12.97□□□□□ -0.33
LYSMD3-204ENST00000509384 GREB1Q4ZG55 1949 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 WASH4PA8MWX3 477 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 TP73O15350 636 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 ACSL4O60488 711 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 IRF1P10914 325 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 EPCAMP16422 314 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 RHOQP17081 205 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 TACR2P21452 398 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 CORO1AP31146 461 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 BASP1P80723 227 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 CYP4F8P98187 520 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 DHX9Q08211 1270 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 GALNT2Q10471 571 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 MORF4L2Q15014 288 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 RAB30Q15771 203 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 ARTNQ5T4W7 220 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 RNASEH2BQ5TBB1 312 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 TXNDC8Q6A555 127 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 FBXL22Q6P050 247 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 C4orf22Q6V702 233 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 GAREM2Q75VX8 874 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 TP53INP2Q8IXH6 220 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 PPIL6Q8IXY8 311 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 ZNF683Q8IZ20 524 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 GOLGA6L1Q8N7Z2 621 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 TSEN2Q8NCE0 465 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 HDAC11Q96DB2 347 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 CELF6Q96J87 481 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 RPRD1AQ96P16 312 aaPredicted RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 PRMT1Q99873 361 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 GDF15Q99988 308 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 KLF16Q9BXK1 252 aaPredicted RBP12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 LRRC3Q9BY71 257 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 ZYG11BQ9C0D3 744 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 RNF38Q9H0F5 515 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 ADAM7Q9H2U9 754 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 CERS4Q9HA82 394 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 SMPD4Q9NXE4 827 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 DONSONQ9NYP3 566 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 MPP6Q9NZW5 540 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 DPP7Q9UHL4 492 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 HPCAL4Q9UM19 191 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 SHOC2Q9UQ13 582 aa12.96□□□□□ -0.33
LYSMD3-204ENST00000509384 IGLV3-10A0A075B6K4 115 aa12.95□□□□□ -0.34
LYSMD3-204ENST00000509384 C5orf60A6NFR6 353 aa12.95□□□□□ -0.34
LYSMD3-204ENST00000509384 F5H5T6 163 aa12.95□□□□□ -0.34
LYSMD3-204ENST00000509384 PPFIA2O75334 1257 aa12.95□□□□□ -0.34
LYSMD3-204ENST00000509384 GCATO75600 419 aa12.95□□□□□ -0.34
LYSMD3-204ENST00000509384 RFPL2O75678 378 aa12.95□□□□□ -0.34
LYSMD3-204ENST00000509384 STC2O76061 302 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms