RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 NAALADL1Q9UQQ1 740 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 KNSTRNQ9Y448 316 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 IRAK3Q9Y616 596 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PNPLA7Q6ZV29 1317 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 DHX29Q7Z478 1369 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 SYCP2Q9BX26 1530 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PIK3C2BO00750 1634 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TNRQ92752 1358 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SPAG9O60271 1321 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SOS1Q07889 1333 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 A0A1W2PRG0 241 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CCDC151A5D8V7 595 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 PTGES3LE9PB15 166 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 TRIM13O60858 407 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 BEST1O76090 585 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 WDR47O94967 919 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 HSPA4LO95757 839 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 TSPAN15O95858 294 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 GLDCP23378 1020 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 UQCRC1P31930 480 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 MAGEA10P43363 369 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 ANXA11P50995 505 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 RRADP55042 308 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CDH15P55291 814 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 ATP2C1P98194 919 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 PRPF4BQ13523 1007 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 BAATQ14032 418 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 RAB41Q5JT25 222 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 GARNL3Q5VVW2 1013 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 ARMC6Q6NXE6 501 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 LCNL1Q6ZST4 164 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SLFN11Q7Z7L1 901 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 ANKRD53Q8N9V6 530 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 AVL9Q8NBF6 648 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 PSD4Q8NDX1 1056 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 TBC1D15Q8TC07 691 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 TFAP2CQ92754 450 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 PPP2R3CQ969Q6 453 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 GPHA2Q96T91 129 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 MYOCQ99972 504 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 STRA6Q9BX79 667 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 MAK16Q9BXY0 300 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SMARCAD1Q9H4L7 1026 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 DBNDD1Q9H9R9 158 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 TRPV4Q9HBA0 871 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SEMA4BQ9NPR2 832 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 FSCN3Q9NQT6 498 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 FBXO28Q9NVF7 368 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 NKX1-2Q9UD57 310 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SLCO3A1Q9UIG8 710 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 KCND3Q9UK17 655 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 GTF3C4Q9UKN8 822 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SARDHQ9UL12 918 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SLC45A2Q9UMX9 530 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 PMF1-BGLAPU3KQ54 211 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 GPRASP1Q5JY77 1395 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CYP3A7-CYP3A51PA0A087WV96 503 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 A0A1W2PS29 197 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SH3D21A4FU49 640 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 NPIPB15A6NHN6 443 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 GLOD5A6NK44 160 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 MYO1GB0I1T2 1018 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 H0Y626 953 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 WDR46O15213 610 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 TNFSF14O43557 240 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SRGAP2O75044 1071 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 ERAL1O75616 437 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 IPO13O94829 963 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 EIF2S1P05198 315 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 HOXB5P09067 269 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 WEE2P0C1S8 567 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 MED14OSP0DP75 135 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CHN1P15882 459 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SAT1P21673 171 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CYP3A7P24462 503 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 HOXC13P31276 330 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 HTR7P34969 479 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 TOB1P50616 345 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SLFN5Q08AF3 891 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CBFBQ13951 182 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 AAK1Q2M2I8 961 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 FAM90A2PQ658T7 463 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CASC1Q6TDU7 716 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CHST3Q7LGC8 479 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 UBE3BQ7Z3V4 1068 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SLC15A3Q8IY34 581 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 TEX11Q8IYF3 940 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 HACE1Q8IYU2 909 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 FAM109AQ8N4B1 249 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 C11orf65Q8NCR3 313 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 NCSTNQ92542 709 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SGCDQ92629 289 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 DACT3Q96B18 629 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 ZNF845Q96IR2 970 aaPredicted RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SIGLEC10Q96LC7 697 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 GPATCH1Q9BRR8 931 aaKnown RBP2.41□□□□□ -2.02
PDE4D-218ENST00000509368 VN1R3Q9BXE9 311 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 CCDC134Q9H6E4 229 aa2.41□□□□□ -2.02
PDE4D-218ENST00000509368 SEC61A2Q9H9S3 476 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms