RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 NOMO1Q15155 1222 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 SIX1Q15475 284 aaPredicted RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 ZNF77Q15935 545 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 FAM133BQ5BKY9 247 aaKnown RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 FAM72AQ5TYM5 149 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 NCBP2-AS2Q69YL0 99 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 FAM72DQ6L9T8 149 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 RWDD4Q6NW29 188 aaKnown RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 DRICH1Q6PGQ1 229 aaPredicted RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 CHST9Q7L1S5 443 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 ANKS1BQ7Z6G8 1248 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 ADAT2Q7Z6V5 191 aaKnown RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 FAM72BQ86X60 149 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 ARID3BQ8IVW6 561 aaPredicted RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 FAM217AQ8IXS0 508 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 ZNF683Q8IZ20 524 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 MICALL1Q8N3F8 863 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 PQLC3Q8N755 202 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 PLD5Q8N7P1 536 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 RTL3Q8N8U3 475 aaKnown RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 HJURPQ8NCD3 748 aaPredicted RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 SMRP1Q8NCR6 262 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 ITFG1Q8TB96 612 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 ZSCAN18Q8TBC5 510 aaPredicted RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 ADAMTS19Q8TE59 1207 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 GRK7Q8WTQ7 553 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 ING5Q8WYH8 240 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 FGF13Q92913 245 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 SMARCD2Q92925 531 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 USP13Q92995 863 aaPredicted RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 HAUS1Q96CS2 278 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 FAM161BQ96MY7 647 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 RPRD1AQ96P16 312 aaPredicted RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 APOL5Q9BWW9 433 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 TRPV4Q9HBA0 871 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 SMARCAL1Q9NZC9 954 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 FEZ2Q9UHY8 353 aaPredicted RBP10.7□□□□□ -0.7
RFC1-211ENST00000509084 CD207Q9UJ71 328 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 VANGL2Q9ULK5 521 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 DENND4AQ7Z401 1863 aa10.7□□□□□ -0.7
RFC1-211ENST00000509084 A0A1B0GVM2 712 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 TCAF2A6NFQ2 919 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 DRGXA6NNA5 263 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 EFCAB8A8MWE9 144 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 NRG2O14511 850 aaPredicted RBP10.69□□□□□ -0.7
RFC1-211ENST00000509084 PPP1R12AO14974 1030 aaPredicted RBP10.69□□□□□ -0.7
RFC1-211ENST00000509084 GREM1O60565 184 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 KLKB1P03952 638 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 CYBBP04839 570 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 FOSL2P15408 326 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 MX2P20592 715 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 AMPD1P23109 780 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 LTBRP36941 435 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 GGCXP38435 758 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 CDH4P55283 916 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 OTUD4Q01804 1114 aaKnown RBP10.69□□□□□ -0.7
RFC1-211ENST00000509084 XRCC4Q13426 336 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 MPP7Q5T2T1 576 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 NADSYN1Q6IA69 706 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 FBXL22Q6P050 247 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 CCDC117Q8IWD4 279 aaPredicted RBP10.69□□□□□ -0.7
RFC1-211ENST00000509084 LGI2Q8N0V4 545 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 MMGT1Q8N4V1 131 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 PRELID2Q8N945 189 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 ZNF557Q8N988 423 aaPredicted RBP10.69□□□□□ -0.7
RFC1-211ENST00000509084 CCDC26Q8TAB7 109 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 ACTL9Q8TC94 416 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 NKD2Q969F2 451 aaPredicted RBP10.69□□□□□ -0.7
RFC1-211ENST00000509084 MAGOHBQ96A72 148 aaKnown RBP10.69□□□□□ -0.7
RFC1-211ENST00000509084 ASB16Q96NS5 453 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 FERMT1Q9BQL6 677 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 HERPUD2Q9BSE4 406 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 AP1M1Q9BXS5 423 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 BRD8Q9H0E9 1235 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 LRRC19Q9H756 370 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 RBM12Q9NTZ6 932 aaKnown RBP10.69□□□□□ -0.7
RFC1-211ENST00000509084 TMEM248Q9NWD8 314 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 NEU3Q9UQ49 428 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 SNX10Q9Y5X0 201 aa10.69□□□□□ -0.7
RFC1-211ENST00000509084 TRANK1O15050 2925 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 MYO7AQ13402 2215 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 TCRBV7S2A1N4TA0A589 114 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 CFAP69A5D8W1 941 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 HACD1B0YJ81 288 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 LIASO43766 372 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 CLDN11O75508 207 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 PRAMEF12O95522 483 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 GAS8O95995 478 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 SLC6A4P31645 630 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 ETFBP38117 255 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 NDST2P52849 883 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 ZXDBP98169 803 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 DLX2Q07687 328 aaPredicted RBP10.68□□□□□ -0.7
RFC1-211ENST00000509084 C2orf54Q08AI8 447 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 SMAD4Q13485 552 aaKnown RBP10.68□□□□□ -0.7
RFC1-211ENST00000509084 DHX34Q14147 1143 aaKnown RBP10.68□□□□□ -0.7
RFC1-211ENST00000509084 CBX2Q14781 532 aaPredicted RBP10.68□□□□□ -0.7
RFC1-211ENST00000509084 PDK1Q15118 436 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 LLGL1Q15334 1064 aa10.68□□□□□ -0.7
RFC1-211ENST00000509084 MPPE1Q53F39 396 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms