RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 GJB3O75712 270 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 LUC7L3O95232 432 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 SEMA4FO95754 770 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 TRUB2O95900 331 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 FYNP06241 537 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 HLA-EP13747 358 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 CD59P13987 128 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 SLC6A4P31645 630 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 CCR1P32246 355 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 CD70P32970 193 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 MTIF2P46199 727 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 RPS14P62263 151 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 HNRNPA1L2Q32P51 320 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 CT47A1Q5JQC4 288 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 RABGAP1LQ5R372 815 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 DENND1BQ6P3S1 775 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 ZDHHC17Q8IUH5 632 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 CARNMT1Q8N4J0 409 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 ZCCHC9Q8N567 271 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 KDF1Q8NAX2 398 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 SCNM1Q9BWG6 230 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 RSPH9Q9H1X1 276 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 CD93Q9NPY3 652 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 RRN3Q9NYV6 651 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 EIF2B4Q9UI10 523 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 WASF3Q9UPY6 502 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 APOBEC2Q9Y235 224 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 PAXBP1Q9Y5B6 917 aa14.08□□□□□ -0.16
CCHCR1-227ENST00000508852 EDDM13A0A1B0GTR0 161 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 GOLGA6L7A0A1B0GV03 622 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 KCNU1A8MYU2 1149 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 E5RJQ4 531 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 PAPSS1O43252 624 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 IGLV3-25P01717 112 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 CD27P26842 260 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 MAOBP27338 520 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 KRT9P35527 623 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 USP8P40818 1118 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 CSKP41240 450 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 GRIA4P48058 902 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 SGSHP51688 502 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 ECT2LQ008S8 904 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 PDCLQ13371 301 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 TRIP6Q15654 476 aaKnown RBP14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 DCAF6Q58WW2 860 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 NADSYN1Q6IA69 706 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 TAC4Q86UU9 113 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 CHSY1Q86X52 802 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 NAXDQ8IW45 347 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 SHC3Q92529 594 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 RNF34Q969K3 372 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 PPP1R13BQ96KQ4 1090 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 LMLNQ96KR4 655 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 CDC6Q99741 560 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 FAM204AQ9H8W3 233 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 FZD4Q9ULV1 537 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 MSRB2Q9Y3D2 182 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 ITIH6Q6UXX5 1313 aa14.07□□□□□ -0.16
CCHCR1-227ENST00000508852 USP24Q9UPU5 2620 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 FAM221BA6H8Z2 402 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 LRRC72A6NJI9 287 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 FLRT2O43155 660 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 MOCS2O96007 188 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 ADH1BP00325 375 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 TACR2P21452 398 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 RPS24P62847 133 aaKnown RBP14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 MAN2A1Q16706 1144 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 ARHGAP44Q17R89 818 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 INAVAQ3KP66 663 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 PITRM1Q5JRX3 1037 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 SYPL2Q5VXT5 272 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 C11orf57Q6ZUT1 292 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 GLRX5Q86SX6 157 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 FAM124AQ86V42 546 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 LGI2Q8N0V4 545 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 C1orf131Q8NDD1 294 aaKnown RBP14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 GANCQ8TET4 914 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 SNX19Q92543 992 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 PRICKLE1Q96MT3 831 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 CRACR2AQ9BSW2 395 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 NUCKS1Q9H1E3 243 aaKnown RBP14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 PABPC3Q9H361 631 aaKnown RBP14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 GAREM1Q9H706 876 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 SYNCQ9H7C4 482 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 FSCN3Q9NQT6 498 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 CHMP5Q9NZZ3 219 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 ERVW-1Q9UQF0 538 aa14.06□□□□□ -0.16
CCHCR1-227ENST00000508852 A0A1B0GVM2 712 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 SPAARA0A1B0GVQ0 90 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 TCAF2A6NFQ2 919 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 SH3BP5O60239 455 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 SLC9A1P19634 815 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 PON1P27169 355 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 ERCC5P28715 1186 aaPredicted RBP14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 ACSL1P33121 698 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 PLK1P53350 603 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 CAMK4Q16566 473 aa14.05□□□□□ -0.16
CCHCR1-227ENST00000508852 HLA-BQ31612 363 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms