RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 IQCDQ96DY2 449 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 TRAPPC9Q96Q05 1148 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CTAGE1Q96RT6 745 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 SDF4Q9BRK5 362 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CDK19Q9BWU1 502 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 TRIM4Q9C037 500 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 XPO4Q9C0E2 1151 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 BHMT2Q9H2M3 363 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CENPHQ9H3R5 247 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 ANKZF1Q9H8Y5 726 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 SLC40A1Q9NP59 571 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 SERHLQ9NQF3 203 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 ARHGEF3Q9NR81 526 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 SH3BP4Q9P0V3 963 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 IFNKQ9P0W0 207 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 HMG20BQ9P0W2 317 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 BLOC1S6Q9UL45 172 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 HPCAL4Q9UM19 191 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 C15orf41Q9Y2V0 281 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 PPLO60437 1756 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 AKAP12Q02952 1782 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 SH3TC1Q8TE82 1336 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 TUBGCP6Q96RT7 1819 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 PDE4DIPQ5VU43 2346 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 CEMIPQ8WUJ3 1361 aa4.9□□□□□ -1.63
PDLIM5-211ENST00000508531 ITSN1Q15811 1721 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 ANKRD26Q9UPS8 1709 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 BTAF1O14981 1849 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 B4DLN1 442 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 H3BQV1 296 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 TP73O15350 636 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 ZSCAN9O15535 394 aaPredicted RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 PFKFB2O60825 505 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 SMIM24O75264 130 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 SYF2O95926 243 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 CCDC166P0CW27 439 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 IDO1P14902 403 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 DPEP1P16444 411 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 VCAM1P19320 739 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 TNFRSF8P28908 595 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 MPGP29372 298 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 CDKN1CP49918 316 aaPredicted RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 UBASH3AP57075 661 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 SSBP2P81877 361 aaPredicted RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 BLMHQ13867 455 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 MYBPC2Q14324 1141 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 USH1GQ495M9 461 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 RNF187Q5TA31 235 aaPredicted RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 SPECC1LQ69YQ0 1117 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 CEP85Q6P2H3 762 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF66Q6ZN08 573 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 BZW1Q7L1Q6 419 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 CROCCP2Q86T23 111 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 CNGA4Q8IV77 575 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 TMTC2Q8N394 836 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 FAM109AQ8N4B1 249 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 KCNG4Q8TDN1 519 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 ATRIPQ8WXE1 791 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 MRPS27Q92552 414 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 DHX58Q96C10 678 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 ZBTB10Q96DT7 871 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 THOC1Q96FV9 657 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 GPATCH3Q96I76 525 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 IFT74Q96LB3 600 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 SCLT1Q96NL6 688 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 AGAP3Q96P47 875 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 IWS1Q96ST2 819 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 TINAGL1Q9GZM7 467 aaPredicted RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 FAM192AQ9GZU8 254 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 MIS12Q9H081 205 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 KAT14Q9H8E8 782 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 TRPV5Q9NQA5 729 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNHIT6Q9NWK9 470 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 HYPKQ9NX55 129 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 LARSQ9P2J5 1176 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 DDX20Q9UHI6 824 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 RCOR1Q9UKL0 485 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 PAIP2BQ9ULR5 123 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 RRP7AQ9Y3A4 280 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 RAD54BQ9Y620 910 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 SYNRGQ9UMZ2 1314 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 COL24A1Q17RW2 1714 aa4.89□□□□□ -1.63
PDLIM5-211ENST00000508531 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 ANO9A1A5B4 782 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 PROB1E7EW31 1015 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 M0QYG6 137 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 PPM1DO15297 605 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 TMCC1O94876 653 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 NXPH3O95157 252 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 LATS1O95835 1130 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 FAM163BP0C2L3 166 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 NHLRC4P0CG21 123 aaPredicted RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 VEGFAP15692 232 aaPredicted RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 KELP23276 732 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 EPHB2P29323 1055 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 ALDH3A1P30838 453 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 CCT6AP40227 531 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 PSMC4P43686 418 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 MTHFSP49914 203 aa4.88□□□□□ -1.63
PDLIM5-211ENST00000508531 FXR1P51114 621 aaKnown RBP eCLIP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms