RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 DEFB106AQ8N104 65 aa16.8■□□□□ 0.28
LMNA-222ENST00000508500 CARNMT1Q8N4J0 409 aa16.8■□□□□ 0.28
LMNA-222ENST00000508500 MINDY1Q8N5J2 469 aa16.8■□□□□ 0.28
LMNA-222ENST00000508500 KDF1Q8NAX2 398 aaPredicted RBP16.8■□□□□ 0.28
LMNA-222ENST00000508500 CADM4Q8NFZ8 388 aa16.8■□□□□ 0.28
LMNA-222ENST00000508500 C1orf216Q8TAB5 229 aa16.8■□□□□ 0.28
LMNA-222ENST00000508500 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
LMNA-222ENST00000508500 SLC2A13Q96QE2 648 aa16.8■□□□□ 0.28
LMNA-222ENST00000508500 PRMT1Q99873 361 aaKnown RBP16.8■□□□□ 0.28
LMNA-222ENST00000508500 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
LMNA-222ENST00000508500 PTPRBP23467 1997 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 PLXNB3Q9ULL4 1909 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 MBD3O95983 291 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 ERBB2P04626 1255 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 CD59P13987 128 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 TACR2P21452 398 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 OXTRP30559 389 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 CSKP41240 450 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 CTSOP43234 321 aaPredicted RBP16.79■□□□□ 0.28
LMNA-222ENST00000508500 FAM193AP78312 1265 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 BNC1Q01954 994 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 PLEKHG6Q3KR16 790 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 WDR45BQ5MNZ6 344 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 FAM183BPQ6ZVS7 135 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 RABEPKQ7Z6M1 372 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 SLC47A2Q86VL8 602 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 APCDD1Q8J025 514 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 LGI2Q8N0V4 545 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 C1orf131Q8NDD1 294 aaKnown RBP16.79■□□□□ 0.28
LMNA-222ENST00000508500 GATA6Q92908 595 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 PPP1R13BQ96KQ4 1090 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 DDX50Q9BQ39 737 aaKnown RBP16.79■□□□□ 0.28
LMNA-222ENST00000508500 NUP58Q9BVL2 599 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 ADAM33Q9BZ11 813 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 LHX5Q9H2C1 402 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 NDST4Q9H3R1 872 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 PLCB1Q9NQ66 1216 aa16.79■□□□□ 0.28
LMNA-222ENST00000508500 SAMSN1Q9NSI8 373 aaKnown RBP16.79■□□□□ 0.28
LMNA-222ENST00000508500 MEI4A8MW99 385 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 KCNU1A8MYU2 1149 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 UPK3BL1B0FP48 263 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 UPK3BL2E5RIL1 263 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 GRAP2O75791 330 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 LUC7L3O95232 432 aaKnown RBP16.78■□□□□ 0.28
LMNA-222ENST00000508500 ATP5BP06576 529 aaKnown RBP16.78■□□□□ 0.28
LMNA-222ENST00000508500 ACADMP11310 421 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 SPINK2P20155 84 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 PTPN20Q4JDL3 420 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 VWA3BQ502W6 1294 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 PITRM1Q5JRX3 1037 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 SYCP2LQ5T4T6 812 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 OTUD1Q5VV17 481 aaPredicted RBP16.78■□□□□ 0.28
LMNA-222ENST00000508500 OLFML1Q6UWY5 402 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 UNQ6494/PRO21346Q6UXR6 183 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 FAM71AQ8IYT1 594 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 ZCCHC9Q8N567 271 aaKnown RBP16.78■□□□□ 0.28
LMNA-222ENST00000508500 TUBGCP2Q9BSJ2 902 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 C6orf106Q9H6K1 298 aaPredicted RBP16.78■□□□□ 0.28
LMNA-222ENST00000508500 DNAAF2Q9NVR5 837 aaKnown RBP16.78■□□□□ 0.28
LMNA-222ENST00000508500 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.28
LMNA-222ENST00000508500 ASNSD1Q9NWL6 643 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 EIF2B4Q9UI10 523 aaKnown RBP16.78■□□□□ 0.28
LMNA-222ENST00000508500 NFE2L3Q9Y4A8 694 aa16.78■□□□□ 0.28
LMNA-222ENST00000508500 A0A1B0GTW7 788 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 SIN3BO75182 1162 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 ERCC5P28715 1186 aaPredicted RBP16.77■□□□□ 0.28
LMNA-222ENST00000508500 NUMBP49757 651 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 IRAK1P51617 712 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 PTK2Q05397 1052 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 FOXC1Q12948 553 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 GRIK2Q13002 908 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 TPD52L1Q16890 204 aaPredicted RBP16.77■□□□□ 0.28
LMNA-222ENST00000508500 CIR1Q86X95 450 aaPredicted RBP16.77■□□□□ 0.28
LMNA-222ENST00000508500 BTN2A3PQ96KV6 586 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 TRIM62Q9BVG3 475 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 NAA15Q9BXJ9 866 aaKnown RBP16.77■□□□□ 0.28
LMNA-222ENST00000508500 NUP62CLQ9H1M0 184 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 RSPH9Q9H1X1 276 aaPredicted RBP16.77■□□□□ 0.28
LMNA-222ENST00000508500 SUSD2Q9UGT4 822 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 SUN2Q9UH99 717 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 SLCO3A1Q9UIG8 710 aa16.77■□□□□ 0.28
LMNA-222ENST00000508500 RALYQ9UKM9 306 aaKnown RBP16.77■□□□□ 0.28
LMNA-222ENST00000508500 CHD5Q8TDI0 1954 aa16.77■□□□□ 0.27
LMNA-222ENST00000508500 PKD1L2Q7Z442 2459 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 SYNJ2BP-COX16A0A087WUM0 186 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 SPAARA0A1B0GVQ0 90 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 TTC34A8MYJ7 566 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 OPHN1O60890 802 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 APOEP02649 317 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 GLI1P08151 1106 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 SYPP08247 313 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 PRKCSHP14314 528 aaPredicted RBP16.76■□□□□ 0.27
LMNA-222ENST00000508500 TFE3P19532 575 aaPredicted RBP16.76■□□□□ 0.27
LMNA-222ENST00000508500 ATXN3P54252 364 aaPredicted RBP16.76■□□□□ 0.27
LMNA-222ENST00000508500 CDH18Q13634 790 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 KLHL40Q2TBA0 621 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 HNRNPA1L2Q32P51 320 aaKnown RBP16.76■□□□□ 0.27
LMNA-222ENST00000508500 EFHC1Q5JVL4 640 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 SMYD5Q6GMV2 418 aa16.76■□□□□ 0.27
LMNA-222ENST00000508500 OR6B2Q6IFH4 312 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms