RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 KCNMB4Q86W47 210 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 ZNF398Q8TD17 642 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
SMG7-214ENST00000508461 TKTL2Q9H0I9 626 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 ABHD16BQ9H3Z7 469 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 ARHGEF4Q9NR80 690 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 PLA2G4CQ9UP65 541 aa13.2□□□□□ -0.3
SMG7-214ENST00000508461 EVPLQ92817 2033 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 BCLAF3A2AJT9 711 aaKnown RBP13.19□□□□□ -0.3
SMG7-214ENST00000508461 DNAJC6O75061 913 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 LGR5O75473 907 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 VAPBO95292 243 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 NFKB1P19838 968 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 PTPN7P35236 360 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 ETFBP38117 255 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 PGGT1BP53609 377 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 PLEKHH3Q7Z736 793 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 SENP8Q96LD8 212 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 TINF2Q9BSI4 451 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 HBS1LQ9Y450 684 aaKnown RBP13.19□□□□□ -0.3
SMG7-214ENST00000508461 TREHO43280 583 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 NPR3P17342 541 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 BDNFP23560 247 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 OCRLQ01968 901 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 SLC12A1Q13621 1099 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 HABP4Q5JVS0 413 aaKnown RBP13.19□□□□□ -0.3
SMG7-214ENST00000508461 SYPL2Q5VXT5 272 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 TRNP1Q6NT89 227 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 ZDHHC17Q8IUH5 632 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 PPTC7Q8NI37 304 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 TEKT4Q8WW24 435 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 WNT8BQ93098 351 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
SMG7-214ENST00000508461 KCNK16Q96T55 309 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 OMDQ99983 421 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 CDY2AQ9Y6F7 541 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 COL11A2P13942 1736 aaPredicted RBP13.19□□□□□ -0.3
SMG7-214ENST00000508461 SMPD1P17405 629 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 EDNRBP24530 442 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 PRKD1Q15139 912 aaPredicted RBP13.19□□□□□ -0.3
SMG7-214ENST00000508461 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
SMG7-214ENST00000508461 ULK2Q8IYT8 1036 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 TDRD5Q8NAT2 981 aaKnown RBP13.19□□□□□ -0.3
SMG7-214ENST00000508461 CATSPER2Q96P56 530 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 SERPINI1Q99574 410 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 EBF2Q9HAK2 575 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 PTPRHQ9HD43 1115 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 MID2Q9UJV3 735 aa13.19□□□□□ -0.3
SMG7-214ENST00000508461 ITM2AO43736 263 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 NOS2P35228 1153 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 SERPINB8P50452 374 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 NAGLUP54802 743 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 SLC10A2Q12908 348 aaPredicted RBP13.18□□□□□ -0.3
SMG7-214ENST00000508461 TAF1CQ15572 869 aaPredicted RBP13.18□□□□□ -0.3
SMG7-214ENST00000508461 TRIM67Q6ZTA4 783 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 UNC93AQ86WB7 457 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 TP53INP2Q8IXH6 220 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 MOCOSQ96EN8 888 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 FAM193BQ96PV7 902 aaPredicted RBP13.18□□□□□ -0.3
SMG7-214ENST00000508461 AGAP2Q99490 1192 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
SMG7-214ENST00000508461 SNX15Q9NRS6 342 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 TMEM216Q9P0N5 145 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 PSAT1Q9Y617 370 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 GNAT1P11488 350 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 PRAMEP78395 509 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 TBL3Q12788 808 aaKnown RBP13.18□□□□□ -0.3
SMG7-214ENST00000508461 MFSD10Q14728 455 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 TAF12Q16514 161 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 KIF19Q2TAC6 998 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 SPDYAQ5MJ70 313 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 TFAP2DQ7Z6R9 452 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 FICDQ9BVA6 458 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 WDR55Q9H6Y2 383 aaPredicted RBP13.18□□□□□ -0.3
SMG7-214ENST00000508461 ABI2Q9NYB9 513 aaPredicted RBP13.18□□□□□ -0.3
SMG7-214ENST00000508461 OR12D3Q9UGF7 316 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 MDM4O15151 490 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 HFE2Q6ZVN8 426 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 SLC26A9Q7LBE3 791 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 NT5DC4Q86YG4 428 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 ZNF567Q8N184 647 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 C2orf69Q8N8R5 385 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 MIPEPQ99797 713 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 CHRAC1Q9NRG0 131 aa13.18□□□□□ -0.3
SMG7-214ENST00000508461 PRG3Q9Y2Y8 225 aaPredicted RBP13.18□□□□□ -0.3
SMG7-214ENST00000508461 C17orf102A2RUQ5 167 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 GIPC1O14908 333 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 THP07101 528 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 MMP3P08254 477 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 T-ENOLP0DO92 83 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 SCNN1GP51170 649 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 PKNOX1P55347 436 aa13.17□□□□□ -0.3
SMG7-214ENST00000508461 MRPS5P82675 430 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms