RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PLIN4Q96Q06 1357 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ATXN2Q99700 1313 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SNED1Q8TER0 1413 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 A0A1W2PQH9 124 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 LRRC53A6NM62 1247 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CHURC1-FNTBB4DL54 471 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TTI1O43156 1089 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FOXD2O60548 495 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 KRT1P04264 644 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CTSAP10619 480 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ATF2P15336 505 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CYP11B2P19099 503 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SERPINB6P35237 376 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CHKAP35790 457 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GRM5P41594 1212 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FNTBP49356 437 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DGKGP49619 791 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 COL9A3Q14050 684 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TRIM71Q2Q1W2 868 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 EFHC1Q5JVL4 640 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TYW1BQ6NUM6 668 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ADGRD2Q7Z7M1 963 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GAS2L3Q86XJ1 694 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 KLHL7Q8IXQ5 586 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TAGAPQ8N103 731 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CFAP61Q8NHU2 1237 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SUN3Q8TAQ9 357 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC138Q96M89 665 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 STK33Q9BYT3 514 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PDZD7Q9H5P4 517 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PPCSQ9HAB8 311 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RUVBL2Q9Y230 463 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 HGSO14964 777 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CFLARO15519 480 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DDX3YO15523 660 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ICMTO60725 284 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PALMO75781 387 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GFPT2O94808 682 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MICAL2O94851 1124 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PTPN1P18031 435 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 NDUFV2P19404 249 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TNNI3P19429 210 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CCND1P24385 295 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RPA1P27694 616 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 HADHAP40939 763 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MATKP42679 507 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GUCY2FP51841 1108 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 NCALDP61601 193 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TRAP1Q12931 704 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TP53BP2Q13625 1128 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DUOXA1Q1HG43 343 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FAM109BQ6ICB4 259 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FAM129CQ86XR2 697 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CLYBLQ8N0X4 340 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CEP76Q8TAP6 659 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SH3RF2Q8TEC5 729 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DTNBP1Q96EV8 351 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PAGE5Q96GU1 130 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 LRRC37BQ96QE4 947 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PSMB7Q99436 277 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TMEM9BQ9NQ34 198 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PRDM6Q9NQX0 595 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FANCLQ9NW38 375 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CHORDC1Q9UHD1 332 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 LNPEPQ9UIQ6 1025 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGAP26Q9UNA1 814 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 INSL5Q9Y5Q6 135 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MTCH2Q9Y6C9 303 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SPTA1P02549 2419 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 EVPLQ92817 2033 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ZDBF2Q9HCK1 2354 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 TARSL2A2RTX5 802 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 LRRD1A4D1F6 860 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PRR33A8MZF0 331 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CLDN5O00501 218 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 B4GALT5O43286 388 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 FBXO21O94952 628 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 LDOC1O95751 146 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ADH1BP00325 375 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 KRT14P02533 472 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CALB1P05937 261 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PFKFB1P16118 471 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ACO1P21399 889 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 CD72P21854 359 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 IL10P22301 178 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HPDP32754 393 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 RASSF2P50749 326 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ADKP55263 362 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 NLRP12P59046 1061 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 FKBP3Q00688 224 aaKnown RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 MAP3K10Q02779 954 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ADIGQ0VDE8 80 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HYAL1Q12794 435 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SETMARQ53H47 684 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-208ENST00000508342 HLA-DQA1Q5Y7H0 255 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 DENND5BQ6ZUT9 1274 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 SERINC5Q86VE9 423 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 MMGT1Q8N4V1 131 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 ANKS1AQ92625 1134 aa3.03□□□□□ -1.92
NEDD4-208ENST00000508342 PPWD1Q96BP3 646 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms