RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 TCP11X2Q5H9J9 407 aa14.78□□□□□ -0.04
RAB28-205ENST00000508274 CIR1Q86X95 450 aaPredicted RBP14.78□□□□□ -0.04
RAB28-205ENST00000508274 CEP76Q8TAP6 659 aa14.78□□□□□ -0.04
RAB28-205ENST00000508274 TTC17Q96AE7 1141 aa14.78□□□□□ -0.04
RAB28-205ENST00000508274 BTN2A3PQ96KV6 586 aa14.78□□□□□ -0.04
RAB28-205ENST00000508274 DDIT4Q9NX09 232 aa14.78□□□□□ -0.04
RAB28-205ENST00000508274 TAB2Q9NYJ8 693 aa14.78□□□□□ -0.04
RAB28-205ENST00000508274 MEI4A8MW99 385 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 IGLV3-19P01714 112 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 GGCXP38435 758 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 CTSOP43234 321 aaPredicted RBP14.77□□□□□ -0.04
RAB28-205ENST00000508274 PLEKHG6Q3KR16 790 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 PITRM1Q5JRX3 1037 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 KLHDC7AQ5VTJ3 777 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 C11orf57Q6ZUT1 292 aaPredicted RBP14.77□□□□□ -0.04
RAB28-205ENST00000508274 ATP6V0D2Q8N8Y2 350 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 FOXJ1Q92949 421 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 MRGPRX3Q96LB0 322 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 PRMT1Q99873 361 aaKnown RBP14.77□□□□□ -0.04
RAB28-205ENST00000508274 ADAM33Q9BZ11 813 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 ASNSD1Q9NWL6 643 aa14.77□□□□□ -0.04
RAB28-205ENST00000508274 PCNX2A6NKB5 2137 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 KCNU1A8MYU2 1149 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 GLI1P08151 1106 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 UCHL3P15374 230 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 PMLP29590 882 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 RPS14P62263 151 aaKnown RBP14.77□□□□□ -0.05
RAB28-205ENST00000508274 CDK17Q00537 523 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 GFPT1Q06210 699 aaPredicted RBP14.77□□□□□ -0.05
RAB28-205ENST00000508274 NME3Q13232 169 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 EFHC1Q5JVL4 640 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 SYCP2LQ5T4T6 812 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 DCAF12L1Q5VU92 463 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 OTUD1Q5VV17 481 aaPredicted RBP14.77□□□□□ -0.05
RAB28-205ENST00000508274 TAF3Q5VWG9 929 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 APCDD1Q8J025 514 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 MINDY1Q8N5J2 469 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 ZNF557Q8N988 423 aaPredicted RBP14.77□□□□□ -0.05
RAB28-205ENST00000508274 DEFB124Q8NES8 71 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 NOX5Q96PH1 765 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 NAA15Q9BXJ9 866 aaKnown RBP14.77□□□□□ -0.05
RAB28-205ENST00000508274 SYNCQ9H7C4 482 aa14.77□□□□□ -0.05
RAB28-205ENST00000508274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.77□□□□□ -0.05
RAB28-205ENST00000508274 MAP1BP46821 2468 aaKnown RBP14.76□□□□□ -0.05
RAB28-205ENST00000508274 F5H5T6 163 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 H0Y626 953 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 ARHGAP33O14559 1287 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 DAB1O75553 588 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 CYP11B1P15538 503 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 TFE3P19532 575 aaPredicted RBP14.76□□□□□ -0.05
RAB28-205ENST00000508274 EEF1GP26641 437 aaKnown RBP14.76□□□□□ -0.05
RAB28-205ENST00000508274 OXTRP30559 389 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 ACSL1P33121 698 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 KLK7P49862 253 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 IRAK1P51617 712 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 ATXN3P54252 364 aaPredicted RBP14.76□□□□□ -0.05
RAB28-205ENST00000508274 SLC6A3Q01959 620 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 CENPCQ03188 943 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 ZNF252P-AS1Q0IIN9 211 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 C2CD6Q53TS8 623 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 SLC26A9Q7LBE3 791 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 RABEPKQ7Z6M1 372 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 ZCCHC9Q8N567 271 aaKnown RBP14.76□□□□□ -0.05
RAB28-205ENST00000508274 DNASE2BQ8WZ79 361 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 RNF34Q969K3 372 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 NUP58Q9BVL2 599 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 MIR1-1HGQ9H1L0 117 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 ERVW-1Q9UQF0 538 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 CEP83Q9Y592 693 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 SLCO1B1Q9Y6L6 691 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 WDFY3Q8IZQ1 3526 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 ASPMQ8IZT6 3477 aa14.76□□□□□ -0.05
RAB28-205ENST00000508274 SIN3BO75182 1162 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 C7P10643 843 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 ABCB4P21439 1286 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 CCR1P32246 355 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 CDH5P33151 784 aaPredicted RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 ST8SIA6P61647 398 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 WDR45BQ5MNZ6 344 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 CDKAL1Q5VV42 579 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 RBM43Q6ZSC3 357 aaKnown RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 NOP9Q86U38 636 aaKnown RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 CCDC117Q8IWD4 279 aaPredicted RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 DHX40Q8IX18 779 aaKnown RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 CCAR2Q8N163 923 aaKnown RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 CADM4Q8NFZ8 388 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 ENOX1Q8TC92 643 aaKnown RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 IGSF8Q969P0 613 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 RPL10LQ96L21 214 aaKnown RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 VPS16Q9H269 839 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 GANQ9H2C0 597 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 C6orf106Q9H6K1 298 aaPredicted RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 ANLNQ9NQW6 1124 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 KIAA1522Q9P206 1035 aaPredicted RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 EIF2B4Q9UI10 523 aaKnown RBP14.75□□□□□ -0.05
RAB28-205ENST00000508274 EPG5Q9HCE0 2579 aa14.75□□□□□ -0.05
RAB28-205ENST00000508274 TMEM131Q92545 1883 aa14.74□□□□□ -0.05
RAB28-205ENST00000508274 METTL12A8MUP2 240 aa14.74□□□□□ -0.05
RAB28-205ENST00000508274 TTC34A8MYJ7 566 aa14.74□□□□□ -0.05
RAB28-205ENST00000508274 F8VZ95 297 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms