RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 KDF1Q8NAX2 398 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PHC3Q8NDX5 983 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 GSTCDQ8NEC7 633 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 RP9Q8TA86 221 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 JOSD2Q8TAC2 188 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 RIN3Q8TB24 985 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 RDH11Q8TC12 318 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PYDC1Q8WXC3 89 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TFAP2BQ92481 460 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 ACSF2Q96CM8 615 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PRR11Q96HE9 360 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MPP4Q96JB8 637 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PRICKLE1Q96MT3 831 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 TSNARE1Q96NA8 513 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 APOL6Q9BWW8 343 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 BCO2Q9BYV7 579 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MTMR12Q9C0I1 747 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF541Q9H0D2 1346 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 C12orf65Q9H3J6 166 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SMYD3Q9H7B4 428 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 USP29Q9HBJ7 922 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 AS3MTQ9HBK9 375 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SAE1Q9UBE0 346 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 VTI1BQ9UEU0 232 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MARCOQ9UEW3 520 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 FBXO40Q9UH90 709 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PCSK1NQ9UHG2 260 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 CNOT11Q9UKZ1 510 aaKnown RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 POMPQ9Y244 141 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PCDHB12Q9Y5F1 795 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 PCDHAC2Q9Y5I4 1007 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 MAFBQ9Y5Q3 323 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SQORQ9Y6N5 450 aa5.1□□□□□ -1.59
HMGB3P16-201ENST00000508037 SCN4AP35499 1836 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CNTNAP1P78357 1384 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 RGSL1A5PLK6 1076 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 C2orf71A6NGG8 1288 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCDC160A6NGH7 325 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 A6NJR5 290 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MEI4A8MW99 385 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 M0QYV0 167 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 AP3B1O00203 1094 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MEN1O00255 615 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 VWA5AO00534 786 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 PLSCR1O15162 318 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 PFDN1O60925 122 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MAFO75444 373 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MICAL2O94851 1124 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 STAMBPO95630 424 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 HSPA4LO95757 839 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 C1QAP02745 245 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 PROCP04070 461 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ITGA2BP08514 1039 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CSH1P0DML2 217 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CSH2P0DML3 217 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CYP2C8P10632 490 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 RALBP11234 206 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 FGF3P11487 239 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 PDGFRAP16234 1089 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ITGAXP20702 1163 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 PEX2P28328 305 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 PMLP29590 882 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SDC4P31431 198 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 HSPA1LP34931 641 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SPRP35270 261 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SOX11P35716 441 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 GMPRP36959 345 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SCNN1AP37088 669 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 GP5P40197 560 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 AQP4P55087 323 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SOX10P56693 466 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC25A3Q00325 362 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 PTPN11Q06124 597 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SNAPC2Q13487 334 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 TUBB3Q13509 450 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 DCTN2Q13561 401 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 BMPR2Q13873 1038 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 BAATQ14032 418 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 DPYSQ14117 519 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ADGRE1Q14246 886 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 FLOT2Q14254 428 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 STXBP2Q15833 593 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 USP41Q3LFD5 358 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF394Q53GI3 561 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SFT2D3Q587I9 215 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 SPANXN3Q5MJ09 141 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 N4BP2L1Q5TBK1 243 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 GRTP1Q5TC63 336 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MROH9Q5TGP6 573 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 ARMC3Q5W041 872 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 HEATR6Q6AI08 1181 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 MPZL3Q6UWV2 235 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 PACS1Q6VY07 963 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 BNC2Q6ZN30 1099 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CDHR3Q6ZTQ4 885 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 LYSMD3Q7Z3D4 306 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CAND1Q86VP6 1230 aaKnown RBP5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 NT5DC4Q86YG4 428 aa5.09□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCDC60Q8IWA6 550 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms