RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 BTBD9Q96Q07 612 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 G3BP2Q9UN86 482 aaKnown RBP13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PCNTO95613 3336 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 IGKV6-21A0A0C4DH24 114 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 AP1G1O43747 822 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 CREB3O43889 395 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 DNAJA2O60884 412 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 TFAP2AP05549 437 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 TNFAIP1Q13829 316 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 R3HDM1Q15032 1099 aaKnown RBP13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 HSDL1Q3SXM5 330 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 SAMD7Q7Z3H4 446 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 METTL25Q8N6Q8 603 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 CCDC185Q8N715 623 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 COLGALT1Q8NBJ5 622 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 DNERQ8NFT8 737 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 HTR3CQ8WXA8 447 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 CPB2Q96IY4 423 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 CDH19Q9H159 772 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 PICK1Q9NRD5 415 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 SNX15Q9NRS6 342 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 ATXN10Q9UBB4 475 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 TNFSF13BQ9Y275 285 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 LOC285556D6RIA3 1793 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 BPTFQ12830 3046 aa13.77□□□□□ -0.21
SNCAIP-209ENST00000508017 A0A0A0MRY4 1105 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 SOWAHBA6NEL2 793 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 HSPA4LO95757 839 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 PGAM1P18669 254 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 NUDT2P50583 147 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 MRPS22P82650 360 aaKnown RBP13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 IRF9Q00978 393 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 INCA1Q0VD86 236 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 DPYSL2Q16555 572 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 ACOT1Q86TX2 421 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 MARVELD2Q8N4S9 558 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 HIC2Q96JB3 615 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 SPATA13Q96N96 652 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 KCNK16Q96T55 309 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 RTKNQ9BST9 563 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 AS3MTQ9HBK9 375 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 PSMD13Q9UNM6 376 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 AP4E1Q9UPM8 1137 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 SSX2IPQ9Y2D8 614 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 PCDHB12Q9Y5F1 795 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 SCN1AP35498 2009 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 NEMP1O14524 444 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 ASLP04424 464 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 GOT1P17174 413 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 ATXN3P54252 364 aaPredicted RBP13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 DLG2Q15700 870 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 SLC10A6Q3KNW5 377 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 LRRC8BQ6P9F7 803 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 PAOXQ6QHF9 649 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 ADAM32Q8TC27 787 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 C12orf42Q96LP6 360 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 NT5C1AQ9BXI3 368 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 WDR55Q9H6Y2 383 aaPredicted RBP13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 CAB39LQ9H9S4 337 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 MORF4L1Q9UBU8 362 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 HACL1Q9UJ83 578 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 APPL1Q9UKG1 709 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 PHF24Q9UPV7 400 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 NME7Q9Y5B8 376 aa13.76□□□□□ -0.21
SNCAIP-209ENST00000508017 ATP9BO43861 1147 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 CRTAMO95727 393 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 AMHP03971 560 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 P4HA1P13674 534 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 ATP6V1B1P15313 513 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 MX2P20592 715 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 PSMB4P28070 264 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 ATICP31939 592 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 CCR10P46092 362 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 THOP1P52888 689 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 INSCQ1MX18 579 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 NADK2Q4G0N4 442 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 FSCBQ5H9T9 825 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 METTL7BQ6UX53 244 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 SNX32Q86XE0 403 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 HACE1Q8IYU2 909 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 RNF148Q8N7C7 305 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 FAM167AQ96KS9 214 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 CNBD2Q96M20 576 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 FCRL3Q96P31 734 aaPredicted RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 MRPL45Q9BRJ2 306 aaKnown RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 GRIP2Q9C0E4 1043 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 EPB41L1Q9H4G0 881 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 VRTNQ9H8Y1 702 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 SEPT10Q9P0V9 454 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 TXNDC16Q9P2K2 825 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 LZTS1Q9Y250 596 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 G3V2L1 256 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 RNF103O00237 685 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 DENRO43583 198 aaKnown RBP13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 MFSD11O43934 449 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 DGKIO75912 1065 aa13.75□□□□□ -0.21
SNCAIP-209ENST00000508017 CLPTM1O96005 669 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms