RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SMIM22K7EJ46 135 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 CNTN5O94779 1100 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 RHOBTB3O94955 611 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 CPA1P15085 419 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 GPD1P21695 349 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 PRPH2P23942 346 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 VPS41P49754 854 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 NR1H2P55055 460 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 INHBCP55103 352 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 PROK1P58294 105 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 THOC5Q13769 683 aaKnown RBP3.85□□□□□ -1.79
LSM6-205ENST00000507449 KPNB1Q14974 876 aaKnown RBP3.85□□□□□ -1.79
LSM6-205ENST00000507449 ANKRD1Q15327 319 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 ERCC6LQ2NKX8 1250 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 PROSER3Q2NL68 480 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 SLC4A8Q2Y0W8 1093 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 CBWD5Q5RIA9 395 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 AKNAD1Q5T1N1 836 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 ARHGEF25Q86VW2 580 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 CHSY1Q86X52 802 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 GALNT4Q8N4A0 578 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 USP38Q8NB14 1042 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 ADAMTS18Q8TE60 1221 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 MPP4Q96JB8 637 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 CCDC17Q96LX7 622 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 FYTTD1Q96QD9 318 aaKnown RBP3.85□□□□□ -1.79
LSM6-205ENST00000507449 HTATIP2Q9BUP3 242 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 HDHD5Q9BXW7 423 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 AGXT2Q9BYV1 514 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 GPR63Q9BZJ6 419 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 UBA5Q9GZZ9 404 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 OSBPL5Q9H0X9 879 aaPredicted RBP3.85□□□□□ -1.79
LSM6-205ENST00000507449 IKZF4Q9H2S9 585 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 ANAPC4Q9UJX5 808 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 HSF4Q9ULV5 492 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 AFG3L2Q9Y4W6 797 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 SIRT4Q9Y6E7 314 aaPredicted RBP3.85□□□□□ -1.79
LSM6-205ENST00000507449 WNT6Q9Y6F9 365 aa3.85□□□□□ -1.79
LSM6-205ENST00000507449 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 SAC3D1A6NKF1 404 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 C17orf100A8MU93 164 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 PRRT4C9JH25 899 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 POC1B-GALNT4F8VUJ3 575 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 SEPT4O43236 478 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 DHX16O60231 1041 aaKnown RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 GCATO75600 419 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 HNRNPA1P09651 372 aaKnown RBP eCLIP3.84□□□□□ -1.79
LSM6-205ENST00000507449 ALDOCP09972 364 aaKnown RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 ATP1A3P13637 1013 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 ARSAP15289 507 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 PCP4P48539 62 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 VAMP2P63027 116 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 MPP1Q00013 466 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 TBX2Q13207 712 aaPredicted RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 G3BP1Q13283 466 aaKnown RBP eCLIP3.84□□□□□ -1.79
LSM6-205ENST00000507449 TRPC3Q13507 836 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 SIM2Q14190 667 aaPredicted RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 WDR45BQ5MNZ6 344 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 SLC9C2Q5TAH2 1124 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 ANO7Q6IWH7 933 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 RETSATQ6NUM9 610 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 ZNF474Q6S9Z5 364 aaPredicted RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 SERPINA13PQ6UXR4 307 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 RANBP10Q6VN20 620 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 MDGA2Q7Z553 956 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 SCN4BQ8IWT1 228 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 TEX19Q8NA77 164 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 SRFBP1Q8NEF9 429 aaKnown RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 CELF1Q92879 486 aaKnown RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 RRP36Q96EU6 259 aaKnown RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 P2RY11Q96G91 374 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 MASTLQ96GX5 879 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 PPP1R10Q96QC0 940 aaKnown RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 SEC62Q99442 399 aaKnown RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 NUAK2Q9H093 628 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 PRDM16Q9HAZ2 1276 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 SLC13A4Q9UKG4 626 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 PNMA2Q9UL42 364 aa3.84□□□□□ -1.79
LSM6-205ENST00000507449 HEMK1Q9Y5R4 338 aaPredicted RBP3.84□□□□□ -1.79
LSM6-205ENST00000507449 FAM90A7PA6NKC0 464 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 FAM90A22PA8MWA6 464 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 FAM90A12PA8MX19 464 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 FAM90A23PA8MXZ1 464 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 TTC34A8MYJ7 566 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 SLC3A2P08195 630 aaKnown RBP3.83□□□□□ -1.8
LSM6-205ENST00000507449 CHRM5P08912 532 aaPredicted RBP3.83□□□□□ -1.8
LSM6-205ENST00000507449 CYP2A6P11509 494 aaPredicted RBP3.83□□□□□ -1.8
LSM6-205ENST00000507449 TNFAIP3P21580 790 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 SOX2P48431 317 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 MVDP53602 400 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.83□□□□□ -1.8
LSM6-205ENST00000507449 MAPK7Q13164 816 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 SEMA3AQ14563 771 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 RALBP1Q15311 655 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 TMEM63BQ5T3F8 832 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 PRAMEF17Q5VTA0 474 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 MTFR2Q6P444 385 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 TMEM88Q6PEY1 159 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 VSTM1Q6UX27 236 aa3.83□□□□□ -1.8
LSM6-205ENST00000507449 RNF144BQ7Z419 303 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms