RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CCDC42Q96M95 316 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 RPRD1AQ96P16 312 aaPredicted RBP18.77■□□□□ 0.6
NPHP4-210ENST00000506941 HAPLN3Q96S86 360 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 PRRX2Q99811 253 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 NUP85Q9BW27 656 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 KCNH6Q9H252 994 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 MRPL47Q9HD33 250 aaKnown RBP18.77■□□□□ 0.6
NPHP4-210ENST00000506941 STARD13Q9Y3M8 1113 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 NUP205Q92621 2012 aa18.77■□□□□ 0.6
NPHP4-210ENST00000506941 WDR87Q6ZQQ6 2873 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 H0Y858 1186 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 KLF8O95600 359 aaPredicted RBP18.76■□□□□ 0.59
NPHP4-210ENST00000506941 CCR3P51677 355 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 MRPS21P82921 87 aaKnown RBP18.76■□□□□ 0.59
NPHP4-210ENST00000506941 LMAN2Q12907 356 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 RABGAP1LQ5R372 815 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 TTC39BQ5VTQ0 682 aaPredicted RBP18.76■□□□□ 0.59
NPHP4-210ENST00000506941 CCAR2Q8N163 923 aaKnown RBP18.76■□□□□ 0.59
NPHP4-210ENST00000506941 CCDC33Q8N5R6 958 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 ZNF513Q8N8E2 541 aaPredicted RBP18.76■□□□□ 0.59
NPHP4-210ENST00000506941 NTAN1Q96AB6 310 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 PANX2Q96RD6 677 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 ACOX2Q99424 681 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 GGA2Q9UJY4 613 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 PLXND1Q9Y4D7 1925 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 FRYLO94915 3013 aa18.76■□□□□ 0.59
NPHP4-210ENST00000506941 IGLV3-10A0A075B6K4 115 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 A0A1B0GVM2 712 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 TCAF2A6NFQ2 919 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 E9PAM4 449 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 FAM72CH0Y354 149 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 K7ESF4 209 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 ADAM23O75077 832 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 ATG13O75143 517 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 CNTN5O94779 1100 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 PAPSS2O95340 614 aaPredicted RBP18.75■□□□□ 0.59
NPHP4-210ENST00000506941 PABPC1P11940 636 aaKnown RBP18.75■□□□□ 0.59
NPHP4-210ENST00000506941 FECHP22830 423 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 CXCL12P48061 93 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 CSTF1Q05048 431 aaKnown RBP18.75■□□□□ 0.59
NPHP4-210ENST00000506941 SCAPQ12770 1279 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 CDH18Q13634 790 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 FUT11Q495W5 492 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 ALFQ53S48 1182 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 FAM72AQ5TYM5 149 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 DAB2IPQ5VWQ8 1189 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 FAM72DQ6L9T8 149 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 NUDT18Q6ZVK8 323 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 ADIPOR2Q86V24 386 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 FAM72BQ86X60 149 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 TXNDC5Q8NBS9 432 aaKnown RBP18.75■□□□□ 0.59
NPHP4-210ENST00000506941 SPC24Q8NBT2 197 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 CCDC26Q8TAB7 109 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 SORCS1Q8WY21 1168 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 BTBD6Q96KE9 485 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 FBXO4Q9UKT5 387 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 MMP17Q9ULZ9 603 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 SPAG17Q6Q759 2223 aa18.75■□□□□ 0.59
NPHP4-210ENST00000506941 DRGXA6NNA5 263 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 H0Y626 953 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 SGK1O00141 431 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 H2AFZP0C0S5 128 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 SP9P0CG40 484 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 HNRNPLP14866 589 aaKnown RBP eCLIP18.74■□□□□ 0.59
NPHP4-210ENST00000506941 ARL13BQ3SXY8 428 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 MANEALQ5VSG8 457 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 CXorf57Q6NSI4 855 aaKnown RBP18.74■□□□□ 0.59
NPHP4-210ENST00000506941 SCYL2Q6P3W7 929 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 CYP4V2Q6ZWL3 525 aaPredicted RBP18.74■□□□□ 0.59
NPHP4-210ENST00000506941 H2AFVQ71UI9 128 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 CHST9Q7L1S5 443 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 SYT13Q7L8C5 426 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 PYROXD2Q8N2H3 581 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 OR52K2Q8NGK3 314 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 KCNV2Q8TDN2 545 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 ACDQ96AP0 544 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 PEBP4Q96S96 227 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 OSBPL2Q9H1P3 480 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 ELOVL2Q9NXB9 296 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 MPP6Q9NZW5 540 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 OR12D3Q9UGF7 316 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 ANAPC7Q9UJX3 599 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 INTS6Q9UL03 887 aaKnown RBP18.74■□□□□ 0.59
NPHP4-210ENST00000506941 FZD10Q9ULW2 581 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 NEU3Q9UQ49 428 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 CEP192Q8TEP8 1941 aa18.74■□□□□ 0.59
NPHP4-210ENST00000506941 USP34Q70CQ2 3546 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 SRGAP2O75044 1071 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 LRCH4O75427 683 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 TMEM253P0C7T8 217 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 NRG1Q02297 640 aaPredicted RBP18.73■□□□□ 0.59
NPHP4-210ENST00000506941 DMWDQ09019 674 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 DMC1Q14565 340 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 EIF4HQ15056 248 aaKnown RBP18.73■□□□□ 0.59
NPHP4-210ENST00000506941 ACBD5Q5T8D3 534 aaPredicted RBP18.73■□□□□ 0.59
NPHP4-210ENST00000506941 TMEM92Q6UXU6 159 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.73■□□□□ 0.59
NPHP4-210ENST00000506941 SLFN11Q7Z7L1 901 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 AHI1Q8N157 1196 aa18.73■□□□□ 0.59
NPHP4-210ENST00000506941 ZNF557Q8N988 423 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms