RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KCNT1Q5JUK3 1230 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 LRRC38Q5VT99 294 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 LRRC31Q6UY01 552 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 ZNF852Q6ZMS4 543 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 POLNQ7Z5Q5 900 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 KIAA0907Q7Z7F0 614 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-210ENST00000506767 SIX5Q8N196 739 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 NAT16Q8N8M0 369 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 LRRC57Q8N9N7 239 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 FAM71BQ8TC56 605 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 FAM3CQ92520 227 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 CD101Q93033 1021 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 BHMTQ93088 406 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 LMLNQ96KR4 655 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 RPRD1AQ96P16 312 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-210ENST00000506767 P2RY13Q9BPV8 354 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 RETREG1Q9H6L5 497 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 FBRSL1Q9HCM7 1045 aaKnown RBP13.25□□□□□ -0.29
TCOF1-210ENST00000506767 ZNF212Q9UDV6 495 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 SLC27A6Q9Y2P4 619 aa13.25□□□□□ -0.29
TCOF1-210ENST00000506767 A0A1B0GVM2 712 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 KANSL1LA0AUZ9 987 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 MACROD2A1Z1Q3 448 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 TYW5A2RUC4 315 aaKnown RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 GRID2IPA4D2P6 1211 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 TCAF2A6NFQ2 919 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 TRIM24O15164 1050 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 SRGAP2O75044 1071 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 CNTN5O94779 1100 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 LUC7L3O95232 432 aaKnown RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 MOCS3O95396 460 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 KRT7P08729 469 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 CD72P21854 359 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 HTR7P34969 479 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 HCAR3P49019 387 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 DGKGP49619 791 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 ZNF135P52742 658 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 CDH4P55283 916 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 MESP2Q0VG99 397 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 PON2Q15165 354 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 IFI16Q16666 785 aaKnown RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 ATP13A4Q4VNC1 1196 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 ASTLQ6HA08 431 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 CHST9Q7L1S5 443 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 DAAM2Q86T65 1068 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 NLRP14Q86W24 1093 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 SUGP1Q8IWZ8 645 aaKnown RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 CCAR2Q8N163 923 aaKnown RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 FIBINQ8TAL6 211 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 WFDC5Q8TCV5 224 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 KCTD15Q96SI1 283 aaPredicted RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 PNKPQ96T60 521 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 ZYG11BQ9C0D3 744 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 GOLPH3Q9H4A6 298 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 DHX35Q9H5Z1 703 aaKnown RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 C11orf16Q9NQ32 467 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 DNAJC17Q9NVM6 304 aaKnown RBP13.24□□□□□ -0.29
TCOF1-210ENST00000506767 STIM2Q9P246 746 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 DEC1Q9P2X7 70 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 GUCA1BQ9UMX6 200 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 TBC1D30Q9Y2I9 924 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 HYOU1Q9Y4L1 999 aa13.24□□□□□ -0.29
TCOF1-210ENST00000506767 WASH4PA8MWX3 477 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 CLDN11O75508 207 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 RHOQP17081 205 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 HLA-FP30511 346 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 SSR1P43307 286 aaKnown RBP13.23□□□□□ -0.29
TCOF1-210ENST00000506767 NAP1L1P55209 391 aaKnown RBP13.23□□□□□ -0.29
TCOF1-210ENST00000506767 FZD5Q13467 585 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 FSTL4Q6MZW2 842 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 CIR1Q86X95 450 aaPredicted RBP13.23□□□□□ -0.29
TCOF1-210ENST00000506767 MFN1Q8IWA4 741 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 REXO1L1PQ8IX06 675 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 RHOT1Q8IXI2 618 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 ZNF557Q8N988 423 aaPredicted RBP13.23□□□□□ -0.29
TCOF1-210ENST00000506767 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 TSC1Q92574 1164 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 HSPH1Q92598 858 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 EZH1Q92800 747 aaPredicted RBP13.23□□□□□ -0.29
TCOF1-210ENST00000506767 EXOC4Q96A65 974 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 TBC1D31Q96DN5 1066 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 NELL2Q99435 816 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 EPAS1Q99814 870 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 OSBPL6Q9BZF3 934 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 TBC1D17Q9HA65 648 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 LTB4R2Q9NPC1 389 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 LZTFL1Q9NQ48 299 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.23□□□□□ -0.29
TCOF1-210ENST00000506767 MPP6Q9NZW5 540 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 CAPN6Q9Y6Q1 641 aa13.23□□□□□ -0.29
TCOF1-210ENST00000506767 TMEM221A6NGB7 291 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 H0Y626 953 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 M0R296 226 aa13.22□□□□□ -0.29
TCOF1-210ENST00000506767 PSTPIP1O43586 416 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms