RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ABCC13Q9NSE7 274 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 FGFR1OP2Q9NVK5 253 aa12.54□□□□□ -0.4
LIN54-206ENST00000506560 F9P00740 461 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 ALDH2P05091 517 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 CSH1P0DML2 217 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 CSH2P0DML3 217 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 ATP5DP30049 168 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 PHBP35232 272 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 FAM117BQ6P1L5 589 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 MICALCLQ6ZW33 695 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 VN1R3Q9BXE9 311 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 PHACTR1Q9C0D0 580 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 ARHGEF38Q9NXL2 777 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 KLHL8Q9P2G9 620 aaPredicted RBP12.53□□□□□ -0.4
LIN54-206ENST00000506560 FAM169AQ9Y6X4 670 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 MTMR11A4FU01 709 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 C2CD2LO14523 706 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 TPSB2P20231 275 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 MGAT1P26572 445 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 MSH2P43246 934 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 DUSP4Q13115 394 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 BMPR2Q13873 1038 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 TPSAB1Q15661 275 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 MGAT5BQ3V5L5 792 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 DCP1BQ8IZD4 617 aaKnown RBP12.53□□□□□ -0.4
LIN54-206ENST00000506560 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 SCML4Q8N228 414 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 MCUQ8NE86 351 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 ZSCAN18Q8TBC5 510 aaPredicted RBP12.53□□□□□ -0.4
LIN54-206ENST00000506560 GIPC2Q8TF65 315 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 SEC16BQ96JE7 1060 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 EPAS1Q99814 870 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 SMOC2Q9H3U7 446 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 SLC24A2Q9UI40 661 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 MICAL3Q7RTP6 2002 aa12.53□□□□□ -0.4
LIN54-206ENST00000506560 SMAPO00193 183 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 DFFAO00273 331 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 PITPNM1O00562 1244 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 NDC80O14777 642 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.4
LIN54-206ENST00000506560 CAPN15O75808 1086 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 CPP00450 1065 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 HMBSP08397 361 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 FGFR3P22607 806 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 GARSP41250 739 aaKnown RBP12.52□□□□□ -0.4
LIN54-206ENST00000506560 PPIDQ08752 370 aaKnown RBP12.52□□□□□ -0.4
LIN54-206ENST00000506560 EFEMP1Q12805 493 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 IFT88Q13099 833 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 PIK3R6Q5UE93 754 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 OTOP3Q7RTS5 596 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 MIB1Q86YT6 1006 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 ARHGAP12Q8IWW6 846 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 RIBC1Q8N443 379 aaPredicted RBP12.52□□□□□ -0.4
LIN54-206ENST00000506560 DENND1AQ8TEH3 1009 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 ARNTL2Q8WYA1 636 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.4
LIN54-206ENST00000506560 CYTH2Q99418 400 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 ELAC2Q9BQ52 826 aaKnown RBP12.52□□□□□ -0.4
LIN54-206ENST00000506560 MLPHQ9BV36 600 aaPredicted RBP12.52□□□□□ -0.4
LIN54-206ENST00000506560 ELAC1Q9H777 363 aaKnown RBP12.52□□□□□ -0.4
LIN54-206ENST00000506560 SYBUQ9NX95 663 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 RRN3Q9NYV6 651 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 SLC17A7Q9P2U7 560 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 OGDHLQ9ULD0 1010 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 PCDHB5Q9Y5E4 795 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 HS3ST4Q9Y661 456 aa12.52□□□□□ -0.4
LIN54-206ENST00000506560 SF3B1O75533 1304 aaKnown RBP eCLIP12.52□□□□□ -0.415e-6■■■■■ 102.5
LIN54-206ENST00000506560 FAM47DPA6NHR8 397 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 SYN3O14994 580 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 TYROBPO43914 113 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 JCHAINP01591 159 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 CA4P22748 312 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 AIF1P55008 147 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 CASC4Q6P4E1 433 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 CNTD1Q8N815 330 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 OR52K1Q8NGK4 314 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 SLC44A1Q8WWI5 657 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 EBNA1BP2Q99848 306 aaKnown RBP12.52□□□□□ -0.41
LIN54-206ENST00000506560 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 NYNRINQ9P2P1 1898 aaKnown RBP12.52□□□□□ -0.41
LIN54-206ENST00000506560 OPHN1O60890 802 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 TOP3BO95985 862 aaKnown RBP12.52□□□□□ -0.41
LIN54-206ENST00000506560 STX2P32856 288 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 GALNT2Q10471 571 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 TAF10Q12962 218 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 KLHL38Q2WGJ6 581 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 SLC39A5Q6ZMH5 540 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 CKAP2Q8WWK9 683 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 DPF3Q92784 378 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 MYEOVQ96EZ4 313 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
LIN54-206ENST00000506560 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
LIN54-206ENST00000506560 SCML2Q9UQR0 700 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms