RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SH3BP1Q9Y3L3 701 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 NEU2Q9Y3R4 380 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 KCTD3Q9Y597 815 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 NME7Q9Y5B8 376 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 PCDHGA3Q9Y5H0 932 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 SLC12A7Q9Y666 1083 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 CSNK1G3Q9Y6M4 447 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 GTF3C1Q12789 2109 aa3.52□□□□□ -1.85
TCOF1-208ENST00000506063 HCFC1P51610 2035 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 HRNRQ86YZ3 2850 aaPredicted RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 DOCK10Q96BY6 2186 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 SLC12A8A0AV02 714 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 FAM92AA1XBS5 289 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 NEMP2A6NFY4 417 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 F8VP50 259 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 C19orf84I3L1E1 186 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 K7ERI5 159 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 E2F3O00716 465 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 RIOK3O14730 519 aaKnown RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 TPP1O14773 563 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 CAPN5O15484 640 aaPredicted RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 LRRTM2O43300 516 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 RAD1O60671 282 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 MAGEC1O60732 1142 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 GCATO75600 419 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 TOM1L1O75674 476 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 RFPL1O75677 317 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 IRF1P10914 325 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 FGF3P11487 239 aaPredicted RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 HARSP12081 509 aaKnown RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 NME1P15531 152 aaKnown RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 BDNFP23560 247 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 HLA-FP30511 346 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 MAT2AP31153 395 aaKnown RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 NPTX2P47972 431 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 MAPK10P53779 464 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 PMS2P54278 862 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 TSPY1Q01534 308 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 PPP2R3AQ06190 1150 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 MAPK7Q13164 816 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 FGL2Q14314 439 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 FZD2Q14332 565 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 CST6Q15828 149 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 RTN1Q16799 776 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 ZNF630Q2M218 657 aaPredicted RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 POM121L1PQ3SYA9 428 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 HS1BP3Q53T59 392 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 EFHC2Q5JST6 749 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 TPRG1LQ5T0D9 272 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 SLC6A19Q695T7 634 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 PPP4R3AQ6IN85 833 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 CASC1Q6TDU7 716 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 VSTM1Q6UX27 236 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 GCNT7Q6ZNI0 430 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 LIMS2Q7Z4I7 341 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 ZNF438Q7Z4V0 828 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 APBB1IPQ7Z5R6 666 aaPredicted RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 ABI3BPQ7Z7G0 1075 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 BIVMQ86UB2 503 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 TRIM69Q86WT6 500 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 METTL23Q86XA0 190 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 APLFQ8IW19 511 aaPredicted RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 UNC5BQ8IZJ1 945 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 CACNA2D3Q8IZS8 1091 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 AHI1Q8N157 1196 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 SDR16C5Q8N3Y7 309 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 IL22RA1Q8N6P7 574 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 RBMXL3Q8N7X1 1067 aaKnown RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 STARD8Q92502 1023 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 GOLGA1Q92805 767 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 NAT6Q93015 286 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 RILPL2Q969X0 211 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 MYLPFQ96A32 169 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 CCDC74AQ96AQ1 378 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM159Q96B96 161 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 HDAC11Q96DB2 347 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM74Q96NL1 305 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 FAM129BQ96TA1 746 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 CIPCQ9C0C6 399 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 STRADBQ9C0K7 418 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 MCCC2Q9HCC0 563 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 EVA1BQ9NVM1 165 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 DDX43Q9NXZ2 648 aaKnown RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 IL37Q9NZH6 218 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 NCKIPSDQ9NZQ3 722 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 VPS54Q9P1Q0 977 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 COPG2Q9UBF2 871 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 CROTQ9UKG9 612 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 TPX2Q9ULW0 747 aaKnown RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 SCML1Q9UN30 329 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 PCDHA12Q9UN75 941 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 NAALADL1Q9UQQ1 740 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 DMTF1Q9Y222 760 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 NTNG1Q9Y2I2 539 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 B3GALT1Q9Y5Z6 326 aa3.51□□□□□ -1.85
TCOF1-208ENST00000506063 MRPS18BQ9Y676 258 aaKnown RBP3.51□□□□□ -1.85
TCOF1-208ENST00000506063 VWA3AA6NCI4 1184 aa3.5□□□□□ -1.85
TCOF1-208ENST00000506063 ZSCAN5CA6NGD5 496 aaPredicted RBP3.5□□□□□ -1.85
TCOF1-208ENST00000506063 KPNA7A9QM74 516 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms