RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CCDC187A0A096LP49 1063 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 ACKR2O00590 384 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 RBMXL2O75526 392 aaKnown RBP6.46□□□□□ -1.38
NIPBL-205ENST00000505998 CER1O95813 267 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 MBPP02686 304 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-205ENST00000505998 MATN1P21941 496 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 DUSP1P28562 367 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 CHKAP35790 457 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 POLE2P56282 527 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 CBFBQ13951 182 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 ITSN1Q15811 1721 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 AWAT1Q58HT5 328 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 CC2D1BQ5T0F9 858 aaKnown RBP6.46□□□□□ -1.38
NIPBL-205ENST00000505998 ACSM6Q6P461 480 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 ZNF782Q6ZMW2 699 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-205ENST00000505998 C16orf71Q8IYS4 520 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-205ENST00000505998 OR52L2PQ8NGH6 319 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 ZNF764Q96H86 408 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-205ENST00000505998 HIC2Q96JB3 615 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 PAAF1Q9BRP4 392 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 KATNAL1Q9BW62 490 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 ABHD10Q9NUJ1 306 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 HERC5Q9UII4 1024 aaKnown RBP6.46□□□□□ -1.38
NIPBL-205ENST00000505998 USP32Q8NFA0 1604 aa6.46□□□□□ -1.38
NIPBL-205ENST00000505998 LRRC7Q96NW7 1537 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 hCG_1642624A0A1W2PR95 340 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 TCEA3O75764 348 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 CENPBP07199 599 aaPredicted RBP6.45□□□□□ -1.38
NIPBL-205ENST00000505998 SLC3A2P08195 630 aaKnown RBP6.45□□□□□ -1.38
NIPBL-205ENST00000505998 CYP2A6P11509 494 aaPredicted RBP6.45□□□□□ -1.38
NIPBL-205ENST00000505998 ATF7P17544 494 aaPredicted RBP6.45□□□□□ -1.38
NIPBL-205ENST00000505998 WDR5P61964 334 aaKnown RBP6.45□□□□□ -1.38
NIPBL-205ENST00000505998 ZRSR2Q15696 482 aaKnown RBP6.45□□□□□ -1.38
NIPBL-205ENST00000505998 CNGA3Q16281 694 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 GRAMD1BQ3KR37 738 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 TUBB8Q3ZCM7 444 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
NIPBL-205ENST00000505998 SYCE2Q6PIF2 218 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 KLHL17Q6TDP4 642 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 RANBP10Q6VN20 620 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 TRABD2AQ86V40 505 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 CACNA2D3Q8IZS8 1091 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 RSC1A1Q92681 617 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 FAR2Q96K12 515 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 CHMP4AQ9BY43 222 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 PTPRHQ9HD43 1115 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 MAFFQ9ULX9 164 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 NFU1Q9UMS0 254 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 PCDHB7Q9Y5E2 793 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 SPATA31A1Q5TZJ5 1347 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 TULP4Q9NRJ4 1543 aa6.45□□□□□ -1.38
NIPBL-205ENST00000505998 ADGRL3Q9HAR2 1447 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 GXYLT2A0PJZ3 443 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 TTC34A8MYJ7 566 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 M0QZQ0 153 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 RPP40O75818 363 aaKnown RBP6.44□□□□□ -1.38
NIPBL-205ENST00000505998 CYP2D6P10635 497 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 GYS1P13807 737 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 HSPA2P54652 639 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 SLC14A1Q13336 389 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 PFKFB3Q16875 520 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-205ENST00000505998 BTBD16Q32M84 506 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 CCDC117Q8IWD4 279 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-205ENST00000505998 GLMPQ8WWB7 406 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 DPF1Q92782 380 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 RTKNQ9BST9 563 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 RNF26Q9BY78 433 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-205ENST00000505998 USP54Q70EL1 1684 aa6.44□□□□□ -1.38
NIPBL-205ENST00000505998 RNF8O76064 485 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 ACTL6BO94805 426 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 THBS4P35443 961 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 ANKRD40Q6AI12 368 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 DPY19L2P1Q6NXN4 242 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 C16orf89Q6UX73 402 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 MYCT1Q8N699 235 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 C8orf58Q8NAV2 365 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 NPIPB3Q92617 1050 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 AKAP1Q92667 903 aaKnown RBP eCLIP6.43□□□□□ -1.38
NIPBL-205ENST00000505998 MCRS1Q96EZ8 462 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 REXO5Q96IC2 774 aaKnown RBP6.43□□□□□ -1.38
NIPBL-205ENST00000505998 C5orf34Q96MH7 638 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 MAGEH1Q9H213 219 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 CDCP1Q9H5V8 836 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 CCDC134Q9H6E4 229 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 SEMA5BQ9P283 1151 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 HEMK1Q9Y5R4 338 aaPredicted RBP6.43□□□□□ -1.38
NIPBL-205ENST00000505998 AKAP12Q02952 1782 aa6.43□□□□□ -1.38
NIPBL-205ENST00000505998 MON2Q7Z3U7 1717 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 RGPD8O14715 1765 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-205ENST00000505998 WIPF3A6NGB9 483 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 KIF28PB7ZC32 967 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 MASP2O00187 686 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 VPS41P49754 854 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 AP2B1P63010 937 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 FOXO1Q12778 655 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 ZNF569Q5MCW4 686 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 ZNF66Q6ZN08 573 aa6.42□□□□□ -1.38
NIPBL-205ENST00000505998 SLC44A2Q8IWA5 706 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-205ENST00000505998 OR1N1Q8NGS0 311 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms