RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RMI1Q9H9A7 625 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 PDE11AQ9HCR9 933 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 G6PC2Q9NQR9 355 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 LMTK3Q96Q04 1460 aa4.53□□□□□ -1.68
TOPBP1-204ENST00000505804 TP73O15350 636 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 INPPL1O15357 1258 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 CELA2AP08217 269 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 HSD3B1P14060 373 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 CHN1P15882 459 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 EPHB2P29323 1055 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 HOXA7P31268 230 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 ARHGAP25P42331 645 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 SOX2P48431 317 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 ACTR2P61160 394 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 BIRC3Q13489 604 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 SUPT20HL1Q3ZLR7 823 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 EARS2Q5JPH6 523 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC18B1Q6NT16 456 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 SYCE2Q6PIF2 218 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 RASGRP2Q7LDG7 609 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 YTHDF3Q7Z739 585 aaKnown RBP4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 C2CD5Q86YS7 1000 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 CNGA4Q8IV77 575 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 ANKRD18AQ8IVF6 992 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 EXD3Q8N9H8 876 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 FSIP1Q8NA03 581 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 ADPRHL1Q8NDY3 354 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC2A12Q8TD20 617 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 ARRDC3Q96B67 414 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 ZSCAN31Q96LW9 406 aaPredicted RBP4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 ZNF347Q96SE7 839 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 POLR3GLQ9BT43 218 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 PLEKHA2Q9HB19 425 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 MTMR4Q9NYA4 1195 aa4.52□□□□□ -1.69
TOPBP1-204ENST00000505804 EMSYQ7Z589 1322 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC22A23A1A5C7 686 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 GRM8O00222 908 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 TFRCP02786 760 aaKnown RBP4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 TK1P04183 234 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 AKR1A1P14550 325 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 TGM2P21980 687 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 RPS6KB1P23443 525 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 ATP5F1P24539 256 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 CCT5P48643 541 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 CDK18Q07002 472 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 STIM1Q13586 685 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 DAZAP2Q15038 168 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 GPR162Q16538 588 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 TMEM95Q3KNT9 176 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 ZNF484Q5JVG2 852 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 FBXO47Q5MNV8 452 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 ZNF474Q6S9Z5 364 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 SMAP1Q8IYB5 467 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 TMEM57Q8N5G2 664 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 PTGR2Q8N8N7 351 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 KCNJ9Q92806 393 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 COG8Q96MW5 612 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 NPAS1Q99742 590 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 FAM118BQ9BPY3 351 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 SEMA4CQ9C0C4 833 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 TMLHEQ9NVH6 421 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 FRMD4BQ9Y2L6 1034 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 DERAQ9Y315 318 aa4.51□□□□□ -1.69
TOPBP1-204ENST00000505804 CYP2D7A0A087X1C5 515 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 KCNU1A8MYU2 1149 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 STX16-NPEPL1H3BU86 382 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 EIF3FO00303 357 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 STX16O14662 325 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 HNRNPRO43390 633 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 CD63P08962 238 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 PRR35P0CG20 571 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 CKMT1AP12532 417 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 LYL1P12980 280 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 C21orf58P58505 322 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 GHRHRQ02643 423 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 RAPGEF1Q13905 1077 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 LIPMQ5VYY2 423 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 SLC2A7Q6PXP3 512 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 ANKS1BQ7Z6G8 1248 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 CERS3Q8IU89 383 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 ARL14EPQ8N8R7 260 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 LINS1Q8NG48 757 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 CEP70Q8NHQ1 597 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 KAT2BQ92831 832 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 ATP2A3Q93084 1043 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 GCC1Q96CN9 775 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 KTI12Q96EK9 354 aaPredicted RBP4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 ADAD1Q96M93 576 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 PYM1Q9BRP8 204 aaKnown RBP4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 HERC2P3Q9BVR0 1158 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 SCNM1Q9BWG6 230 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 HDHD5Q9BXW7 423 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 CLPBQ9H078 707 aa4.5□□□□□ -1.69
TOPBP1-204ENST00000505804 C2CD4BA6NLJ0 364 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 SEPT4O43236 478 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 BCAR3O75815 825 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 SGPL1O95470 568 aa4.49□□□□□ -1.69
TOPBP1-204ENST00000505804 CSF1P09603 554 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms