RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ZNF280DQ6N043 979 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 ZNF567Q8N184 647 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 GDAP1Q8TB36 358 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 ADAM32Q8TC27 787 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 LRRC8CQ8TDW0 803 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 C2orf15Q8WU43 125 aaKnown RBP17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 TSGA13Q96PP4 275 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 TMEM175Q9BSA9 504 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 RHOBTB2Q9BYZ6 727 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 ARL2BPQ9Y2Y0 163 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 MFHAS1Q9Y4C4 1052 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 MAD1L1Q9Y6D9 718 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 LRIG2O94898 1065 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 PTPN3P26045 913 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 PSEN1P49768 467 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 PLEKHG4Q58EX7 1191 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 PID1Q7Z2X4 250 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 SPATA21Q7Z572 469 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 ZNF280BQ86YH2 543 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 C4orf33Q8N1A6 199 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 NUP93Q8N1F7 819 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 AGGF1Q8N302 714 aaeCLIP17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 CEP295NLQ96MC4 621 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 GBA3Q9H227 469 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 FGFR1OP2Q9NVK5 253 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 MOCS1Q9NZB8 636 aa17.75■□□□□ 0.43
TRAPPC11-204ENST00000505676 FAM72CH0Y354 149 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 SPAG7O75391 227 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 AP2A1O95782 977 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 IBSPP21815 317 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 RPA3P35244 121 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 MRPL58Q14197 206 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 PRPSAP1Q14558 356 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 SLC39A12Q504Y0 691 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 FAM72AQ5TYM5 149 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 FAM72DQ6L9T8 149 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 MARK2Q7KZI7 788 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 FAM72BQ86X60 149 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 CTAGE3PQ8IX95 158 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 TBC1D31Q96DN5 1066 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 TMEM209Q96SK2 561 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 OLA1Q9NTK5 396 aaKnown RBP17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 IL37Q9NZH6 218 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 ADAM28Q9UKQ2 775 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 A0A1W2PPM1 405 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 MAGEB16A2A368 324 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 H7C4K7 107 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 RTN3O95197 1032 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 APLP1P51693 650 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 TIFABQ6ZNK6 161 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 CHSY1Q86X52 802 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 TRIM42Q8IWZ5 723 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 PPM1NQ8N819 430 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 CCT6BQ92526 530 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 C1orf74Q96LT6 269 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 PITPNM3Q9BZ71 974 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 RASSF4Q9H2L5 321 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 ANLNQ9NQW6 1124 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 TMPRSS4Q9NRS4 437 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 SEPT10Q9P0V9 454 aa17.74■□□□□ 0.43
TRAPPC11-204ENST00000505676 LPXNO60711 386 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 CCNCP24863 283 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 PSMB4P28070 264 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 CCNFP41002 786 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 PPARDQ03181 441 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 DBN1Q16643 649 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 TEX44Q53QW1 395 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 SPANXN3Q5MJ09 141 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 VARS2Q5ST30 1063 aaKnown RBP17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 MANEALQ5VSG8 457 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 FAM126BQ8IXS8 530 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 KLHDC8BQ8IXV7 354 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 PDCD7Q8N8D1 485 aaKnown RBP17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 ACMSDQ8TDX5 336 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 MRRFQ96E11 262 aaKnown RBP17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 KLHL14Q9P2G3 628 aa17.73■□□□□ 0.43
TRAPPC11-204ENST00000505676 WASH4PA8MWX3 477 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 I6L893 689 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 ENPP3O14638 875 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 FAAP100Q0VG06 881 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 RNF43Q68DV7 783 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 TIGD7Q6NT04 549 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 LVRNQ6Q4G3 990 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 LINC00523Q86TU6 105 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 SPPL2BQ8TCT7 592 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 PAIP2Q9BPZ3 127 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 KIF9Q9HAQ2 790 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 HAUS2Q9NVX0 235 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 CLIC5Q9NZA1 410 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 LRFN2Q9ULH4 789 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 TLR6Q9Y2C9 796 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 FAM92AA1XBS5 289 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 FOXO6A8MYZ6 492 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 ALDH2P05091 517 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 POLBP06746 335 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 NEK3P51956 506 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 CTXN3Q4LDR2 81 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 TRPM8Q7Z2W7 1104 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 SCN4BQ8IWT1 228 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 SCAMP5Q8TAC9 235 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms