RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 CD70P32970 193 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 BNC1Q01954 994 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 ARID5BQ14865 1188 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 HNRNPA1L2Q32P51 320 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 SLC45A4Q5BKX6 768 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 PMF1Q6P1K2 205 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 RFWD3Q6PCD5 774 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 FMR1NBQ8N0W7 255 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 CARNMT1Q8N4J0 409 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 ZNF366Q8N895 744 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 BAHD1Q8TBE0 780 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 TIGD1Q96MW7 591 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 PPP1R9BQ96SB3 815 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 OMDQ99983 421 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 PABPC3Q9H361 631 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 TLR6Q9Y2C9 796 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 CEP83Q9Y592 693 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 ZFYVE26Q68DK2 2539 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 KNL1Q8NG31 2342 aa11.53□□□□□ -0.56
UBE2D3-219ENST00000505207 CABIN1Q9Y6J0 2220 aa11.52□□□□□ -0.56
UBE2D3-219ENST00000505207 CKAP5Q14008 2032 aa11.52□□□□□ -0.56
UBE2D3-219ENST00000505207 GOLGA6L7A0A1B0GV03 622 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 BICDL2A1A5D9 508 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 FAM47DPA6NHR8 397 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 GOLGA8CPA6NN73 597 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 E9PAM4 449 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 TAF4O00268 1085 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 VILLO15195 856 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 YKT6O15498 198 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 MED7O43513 233 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 GNA14O95837 355 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 APOEP02649 317 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 ATXN1LP0C7T5 689 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 CSKP41240 450 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 OXCT1P55809 520 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 GCNT1Q02742 428 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 SLC12A1Q13621 1099 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 COL9A2Q14055 689 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 BEND5Q7L4P6 421 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 UBR7Q8N806 425 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 OR2T34Q8NGX1 318 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 TFAP2BQ92481 460 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 FAM149B1Q96BN6 582 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 MED15Q96RN5 788 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 MIS12Q9H081 205 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 ST7Q9NRC1 585 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 DKK4Q9UBT3 224 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 TJP2Q9UDY2 1190 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 FTSJ1Q9UET6 329 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 FZD4Q9ULV1 537 aa11.52□□□□□ -0.57
UBE2D3-219ENST00000505207 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 A0A1W2PPC4 97 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 H0Y8X5 98 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 PIK3R2O00459 728 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 PAPSS1O43252 624 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 DKK1O94907 266 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 FGFR1OPO95684 399 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 ADH1BP00325 375 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 SLC2A3P11169 496 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 BRD2P25440 801 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 SLC6A4P31645 630 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 SLC8A1P32418 973 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 CTSKP43235 329 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 SGSHP51688 502 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 PMS1P54277 932 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 GALCP54803 685 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 ECT2LQ008S8 904 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 SULT2A1Q06520 285 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 MTA1Q13330 715 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 ACAP1Q15027 740 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 CST6Q15828 149 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 MS4A13Q5J8X5 152 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 FOXR2Q6PJQ5 311 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.573e-6■□□□□ 8.1
UBE2D3-219ENST00000505207 DHX40Q8IX18 779 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 SCUBE3Q8IX30 993 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 ELOA2Q8IYF1 753 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 PDCD7Q8N8D1 485 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 EHBP1Q8NDI1 1231 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 STK32AQ8WU08 396 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 BTN2A3PQ96KV6 586 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 FAM81BQ96LP2 452 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 GDPD2Q9HCC8 539 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 AASDHPPTQ9NRN7 309 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 ERVW-1Q9UQF0 538 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 GPSM3Q9Y4H4 160 aa11.51□□□□□ -0.57
UBE2D3-219ENST00000505207 DSPP15924 2871 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 DMXL2Q8TDJ6 3036 aa11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 A0A1B0GTQ1 180 aa11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 TRIM49BA6NDI0 452 aa11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 MID1O15344 667 aa11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 MAGEC1O60732 1142 aa11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 SIN3BO75182 1162 aa11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 RNASEH2AO75792 299 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 LUC7L3O95232 432 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 ITGAVP06756 1048 aa11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 C1SP09871 688 aa11.5□□□□□ -0.57
UBE2D3-219ENST00000505207 KRT5P13647 590 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms