RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 TTC34A8MYJ7 566 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 SH3BP5O60239 455 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 SIN3BO75182 1162 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 LUC7L3O95232 432 aaKnown RBP13.24□□□□□ -0.29
RNF4-206ENST00000504782 ERBB2P04626 1255 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 ATP5BP06576 529 aaKnown RBP13.24□□□□□ -0.29
RNF4-206ENST00000504782 SYPP08247 313 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 C7P10643 843 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 OXTRP30559 389 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 IRAK1P51617 712 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 KCNMA1Q12791 1236 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 NNTQ13423 1086 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 MEA1Q16626 185 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 PITRM1Q5JRX3 1037 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 LAYNQ6UX15 382 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 FAM183BPQ6ZVS7 135 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 BEND5Q7L4P6 421 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 RABEPKQ7Z6M1 372 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 SLC47A2Q86VL8 602 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 DHX40Q8IX18 779 aaKnown RBP13.24□□□□□ -0.29
RNF4-206ENST00000504782 HDDC3Q8N4P3 179 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 MLKLQ8NB16 471 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 C1orf131Q8NDD1 294 aaKnown RBP13.24□□□□□ -0.29
RNF4-206ENST00000504782 PPP1R13BQ96KQ4 1090 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 PRMT1Q99873 361 aaKnown RBP13.24□□□□□ -0.29
RNF4-206ENST00000504782 SCNM1Q9BWG6 230 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 TMEM121BQ9BXQ6 578 aaPredicted RBP13.24□□□□□ -0.29
RNF4-206ENST00000504782 THAP9Q9H5L6 903 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 SERGEFQ9UGK8 458 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 SLCO3A1Q9UIG8 710 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 ERVW-1Q9UQF0 538 aa13.24□□□□□ -0.29
RNF4-206ENST00000504782 FRYQ5TBA9 3013 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 SPEGQ15772 3267 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 KCNU1A8MYU2 1149 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 UPK3BL1B0FP48 263 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 UPK3BL2E5RIL1 263 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 BCAT2O15382 392 aaPredicted RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 SART1O43290 800 aaKnown RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 HYAL3O43820 417 aaPredicted RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 GNSP15586 552 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 TFE3P19532 575 aaPredicted RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 GGCXP38435 758 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 CSNK1EP49674 416 aaKnown RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 STK19P49842 368 aaPredicted RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 SIM1P81133 766 aaPredicted RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 CDH18Q13634 790 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 PTPN20Q4JDL3 420 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 C9orf64Q5T6V5 341 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 CHSY1Q86X52 802 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 OR52K2Q8NGK3 314 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 SNX19Q92543 992 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 BIRC7Q96CA5 298 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 RPL10LQ96L21 214 aaKnown RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 SLC2A13Q96QE2 648 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 IRX2Q9BZI1 471 aaPredicted RBP13.23□□□□□ -0.29
RNF4-206ENST00000504782 SLC32A1Q9H598 525 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 SUSD2Q9UGT4 822 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 PCDHGC3Q9UN70 934 aa13.23□□□□□ -0.29
RNF4-206ENST00000504782 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 EPG5Q9HCE0 2579 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 WDFY3Q8IZQ1 3526 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 A0A1B0GVT2 93 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 GTPBP10A4D1E9 387 aaKnown RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 H0Y626 953 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 KCNK3O14649 394 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 APOEP02649 317 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 VAV1P15498 845 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 MZF1P28698 734 aaPredicted RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 CENPCQ03188 943 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 E2F5Q15329 346 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 MAN2A1Q16706 1144 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 TPD52L1Q16890 204 aaPredicted RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 HNRNPA1L2Q32P51 320 aaKnown RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 VWA3BQ502W6 1294 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 OR6B2Q6IFH4 312 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 OLFML1Q6UWY5 402 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 C14orf80Q86SX3 495 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 IGSF8Q969P0 613 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 BTN2A3PQ96KV6 586 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 FAM129BQ96TA1 746 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 DDX50Q9BQ39 737 aaKnown RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 ORAI3Q9BRQ5 295 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 RSPH9Q9H1X1 276 aaPredicted RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 NDST4Q9H3R1 872 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 FAM204AQ9H8W3 233 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 EBF2Q9HAK2 575 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 ANLNQ9NQW6 1124 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 SAMSN1Q9NSI8 373 aaKnown RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 DDIT4Q9NX09 232 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 SUN2Q9UH99 717 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 KLK13Q9UKR3 277 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 FNDC3AQ9Y2H6 1198 aaKnown RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.22□□□□□ -0.29
RNF4-206ENST00000504782 NFE2L3Q9Y4A8 694 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 FHOD1Q9Y613 1164 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 ASPMQ8IZT6 3477 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
RNF4-206ENST00000504782 USP24Q9UPU5 2620 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms