RNA–Protein interactions for RNA: ENST00000504571.5

ATP2C1-206, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2C1, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-206ENST00000504571 SMAD1Q15797 465 aaKnown RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 CYP1B1Q16678 543 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 ST3GAL2Q16842 350 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 TBC1D25Q3MII6 688 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 ADCK5Q3MIX3 580 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 ATPAF1Q5TC12 328 aaPredicted RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 RETSATQ6NUM9 610 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 ANKRD16Q6P6B7 361 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 Q6ZPA2 131 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 DPY19L3Q6ZPD9 716 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 PARS2Q7L3T8 475 aaKnown RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 RAB11FIP2Q7L804 512 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 ZNF627Q7L945 461 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 RASGRP2Q7LDG7 609 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 PEG10Q86TG7 708 aaKnown RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 TRABD2AQ86V40 505 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 TTC30AQ86WT1 665 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 Q8N1X5 172 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 FSTL5Q8N475 847 aaPredicted RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 LRRC71Q8N4P6 559 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 TCP11L2Q8N4U5 519 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 NGDNQ8NEJ9 315 aaKnown RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 SLC22A17Q8WUG5 538 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 PDLIM2Q96JY6 352 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 COG8Q96MW5 612 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 TWNKQ96RR1 684 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 ARHGAP39Q9C0H5 1083 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 SEPSECSQ9HD40 501 aaKnown RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 WASH6PQ9NQA3 447 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 CCNL1Q9UK58 526 aaPredicted RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 PACSIN3Q9UKS6 424 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 ASAP1Q9ULH1 1129 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 C19orf53Q9UNZ5 99 aaPredicted RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 RCE1Q9Y256 329 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 PCDHB7Q9Y5E2 793 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 HS3ST3A1Q9Y663 406 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 OVOS2A0A0G2JMS6 1433 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 OVOS2A0A0J9YW53 1432 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 OVOS2Q6IE36 1432 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 RRBP1Q9P2E9 1410 aaKnown RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 DUOX2Q9NRD8 1548 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 RGPD3A6NKT7 1758 aaPredicted RBP3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 RGPD4Q7Z3J3 1758 aa3.83□□□□□ -1.8
ATP2C1-206ENST00000504571 SBF2Q86WG5 1849 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 NRXN3Q9Y4C0 1643 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 PRAG1Q86YV5 1406 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 ARHGEF10O15013 1369 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 KIF15Q9NS87 1388 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 IGSF1Q8N6C5 1336 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 SLC38A8A6NNN8 435 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 EPB41L2O43491 1005 aaKnown RBP3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 PMPCBO75439 489 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 KRT38O76015 456 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 GCP02774 474 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 HSPA8P11142 646 aaKnown RBP3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 ATP1A3P13637 1013 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 RXRAP19793 462 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 GDF5P43026 501 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 CDK7P50613 346 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 SOX10P56693 466 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 EIF4A1P60842 406 aaKnown RBP3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 ACTR2P61160 394 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 LMOD3Q0VAK6 560 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 KCNJ12Q14500 433 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 ERCC6LQ2NKX8 1250 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 DENND2CQ68D51 928 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 C16orf89Q6UX73 402 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 Q6ZWC4 215 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 SYT13Q7L8C5 426 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 SIRT6Q8N6T7 355 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 HTRA1Q92743 480 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 C3orf49Q96BT1 292 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 VPS50Q96JG6 964 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 HERC2P3Q9BVR0 1158 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 SCAND2PQ9GZW5 306 aaPredicted RBP3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 ELAC1Q9H777 363 aaKnown RBP3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 CHODLQ9H9P2 273 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 UBN1Q9NPG3 1134 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 DLL3Q9NYJ7 618 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 FOXJ2Q9P0K8 574 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 ZBTB1Q9Y2K1 713 aa3.82□□□□□ -1.8
ATP2C1-206ENST00000504571 SALL3Q9BXA9 1300 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 A6NLC8 198 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 LINC00473A8K010 186 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 STX16-NPEPL1H3BU86 382 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 QSOX1O00391 747 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 STX16O14662 325 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 CA12O43570 354 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 RAMP2O60895 175 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 HEXIM1O94992 359 aaKnown RBP3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 MBPP02686 304 aaPredicted RBP3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 CNPP09543 421 aaKnown RBP3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 NPSP0C0P6 89 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 EBLN1P0CF75 366 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 TMEM225BP0DP42 221 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 MYCLP12524 364 aaPredicted RBP3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 ALADP13716 330 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 CREB1P16220 341 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 KRT4P19013 534 aa3.81□□□□□ -1.8
ATP2C1-206ENST00000504571 DRD1P21728 446 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms