RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 PNPLA4P41247 253 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 TUBP50607 506 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 CCR5P51681 352 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 SLC37A1P57057 533 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 SHC2P98077 582 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 SLC14A1Q13336 389 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 KPNB1Q14974 876 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 LARS2Q15031 903 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 CERKLQ49MI3 558 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 TCP11L2Q8N4U5 519 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 PNLDC1Q8NA58 520 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 USP38Q8NB14 1042 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 HIC2Q96JB3 615 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 PPP1R10Q96QC0 940 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 RNF26Q9BY78 433 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 TRIM31Q9BZY9 425 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 NUAK2Q9H093 628 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 KLK15Q9H2R5 256 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 SFXN1Q9H9B4 322 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 UBN1Q9NPG3 1134 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 SMC4Q9NTJ3 1288 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 ASIC5Q9NY37 505 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 ZNF69Q9UC07 566 aa5.48□□□□□ -1.53
TRAPPC13-205ENST00000504243 FNDC1Q4ZHG4 1894 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 CCDC196A0A1B0GTZ2 297 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 SAC3D1A6NKF1 404 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 TARM1B6A8C7 271 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 BTBD19C9JJ37 291 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 H7C1Q1 480 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 PRYO14603 147 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 SYN3O14994 580 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 HNRNPA1P09651 372 aaKnown RBP eCLIP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 ALDOCP09972 364 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 ACP5P13686 325 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 TNNT1P13805 278 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 ELF1P32519 619 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 SOX10P56693 466 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 ALKBH1Q13686 389 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 TMEM119Q4V9L6 283 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 GLE1Q53GS7 698 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 CBWD5Q5RIA9 395 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 SUMO4Q6EEV6 95 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 RETSATQ6NUM9 610 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 DHRS13Q6UX07 377 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 RANBP10Q6VN20 620 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 RSRC2Q7L4I2 434 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 LAS2Q8IYD9 372 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 VPS52Q8N1B4 723 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 LINC01465Q8N7H1 131 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 PPHLN1Q8NEY8 458 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 RRP36Q96EU6 259 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 ZNF764Q96H86 408 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 BBC3Q96PG8 261 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 SENP7Q9BQF6 1050 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 HERC2P3Q9BVR0 1158 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 ARHGAP39Q9C0H5 1083 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 ADAM21Q9UKJ8 722 aa5.47□□□□□ -1.53
TRAPPC13-205ENST00000504243 LMTK3Q96Q04 1460 aa5.46□□□□□ -1.53
TRAPPC13-205ENST00000504243 CYP3A7-CYP3A51PA0A087WV96 503 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 HMGB1P1B2RPK0 211 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 PRRT4C9JH25 899 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 TMEM232C9JQI7 657 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 POC1B-GALNT4F8VUJ3 575 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 H3BNC9 293 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 PPFIA2O75334 1257 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 RNF8O76064 485 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 MBD4O95243 580 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 LYL1P12980 280 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 ATP1A3P13637 1013 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 CYP3A7P24462 503 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 HOXD12P35452 270 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 LIFRP42702 1097 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 ELLP55199 621 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 VAMP2P63027 116 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 TDGQ13569 410 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 NFIL3Q16649 462 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 ANXA2RQ3ZCQ2 193 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 WDR78Q5VTH9 848 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 BBS12Q6ZW61 710 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 DNAJC10Q8IXB1 793 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 GALNT4Q8N4A0 578 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 NELL1Q92832 810 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 CELF1Q92879 486 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 TIMP4Q99727 224 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 ACAD9Q9H845 621 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 ALG13Q9NP73 1137 aaKnown RBP5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 THAP1Q9NVV9 213 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 TMEM160Q9NX00 188 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 MTMR4Q9NYA4 1195 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 MAFFQ9ULX9 164 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 GDAQ9Y2T3 454 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 AFG3L2Q9Y4W6 797 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 SIRT4Q9Y6E7 314 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 SPATA31A1Q5TZJ5 1347 aa5.46□□□□□ -1.54
TRAPPC13-205ENST00000504243 TCRBV5S1A1TA0A578 114 aa5.45□□□□□ -1.54
TRAPPC13-205ENST00000504243 CCNT1O60563 726 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-205ENST00000504243 ENO1P06733 434 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-205ENST00000504243 GSTM2P28161 218 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms