RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 FGF14Q92915 247 aa14.28□□□□□ -0.12
CYSTM1-202ENST00000504227 NXPE3Q969Y0 559 aa14.28□□□□□ -0.12
CYSTM1-202ENST00000504227 TRMT61BQ9BVS5 477 aaKnown RBP14.28□□□□□ -0.12
CYSTM1-202ENST00000504227 HEMGNQ9BXL5 484 aa14.28□□□□□ -0.12
CYSTM1-202ENST00000504227 ZYG11BQ9C0D3 744 aa14.28□□□□□ -0.12
CYSTM1-202ENST00000504227 RETREG1Q9H6L5 497 aa14.28□□□□□ -0.12
CYSTM1-202ENST00000504227 CATSPERBQ9H7T0 1116 aa14.28□□□□□ -0.12
CYSTM1-202ENST00000504227 DONSONQ9NYP3 566 aa14.28□□□□□ -0.12
CYSTM1-202ENST00000504227 HELZP42694 1942 aaKnown RBP14.27□□□□□ -0.12
CYSTM1-202ENST00000504227 NUP210Q8TEM1 1887 aaPredicted RBP14.27□□□□□ -0.12
CYSTM1-202ENST00000504227 TBL1XO60907 577 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 TJP3O95049 919 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 KRT10P13645 584 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 AMPD1P23109 780 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 HOXC13P31276 330 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 VCPP55072 806 aaKnown RBP14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 AMPD2Q01433 879 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 FCHO2Q0JRZ9 810 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 TUBB2AQ13885 445 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 DPYSQ14117 519 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 LLGL1Q15334 1064 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 C5orf22Q49AR2 442 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 CCDC181Q5TID7 509 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 AADACL2Q6P093 401 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 CFAP52Q8N1V2 620 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 PCDH19Q8TAB3 1148 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 DDI1Q8WTU0 396 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 COG1Q8WTW3 980 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 ATP2A3Q93084 1043 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 IGSF8Q969P0 613 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 FAF2Q96CS3 445 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 NAP1L3Q99457 506 aaPredicted RBP14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 TUBB2BQ9BVA1 445 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 PLA2G2FQ9BZM2 168 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 ARHGEF4Q9NR80 690 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 MPP6Q9NZW5 540 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 THEGQ9P2T0 379 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 LIMD1Q9UGP4 676 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 NUMBLQ9Y6R0 609 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 DENND4AQ7Z401 1863 aa14.27□□□□□ -0.13
CYSTM1-202ENST00000504227 GFRA2O00451 464 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 APOL1O14791 398 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 CST8O60676 142 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 CLDN11O75508 207 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 NFATC1O95644 943 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 ADH1CP00326 375 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 ERCC2P18074 760 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 CDH4P55283 916 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 RPS24P62847 133 aaKnown RBP14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 NR1H3Q13133 447 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 GRM2Q14416 872 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 LONRF2Q1L5Z9 754 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 EML3Q32P44 896 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 LY6G5CQ5SRR4 150 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 MPP7Q5T2T1 576 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 TMCO3Q6UWJ1 677 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 TPGS1Q6ZTW0 290 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 ANKS1BQ7Z6G8 1248 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 TMEM25Q86YD3 366 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 SLC13A5Q86YT5 568 aaPredicted RBP14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 CCDC117Q8IWD4 279 aaPredicted RBP14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 RASGEF1CQ8N431 466 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 MAIP1Q8WWC4 291 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 IRF7Q92985 503 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 MYEOVQ96EZ4 313 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 FAM83CQ9BQN1 747 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 RPP25Q9BUL9 199 aaKnown RBP14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 SPHK2Q9NRA0 654 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 IGSF9Q9P2J2 1179 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 RNF14Q9UBS8 474 aa14.26□□□□□ -0.13
CYSTM1-202ENST00000504227 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 A0A1B0GVM2 712 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 TCAF2A6NFQ2 919 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 WASH4PA8MWX3 477 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 PGRMC1O00264 195 aaKnown RBP14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 DCLK1O15075 740 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 ZNF185O15231 689 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 CHADO15335 359 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 CNTN5O94779 1100 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 FGGP02679 453 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 IL9P15248 144 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 GDI1P31150 447 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 PAFAH1B1P43034 410 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 DYNLT1P63172 113 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 ZNF177Q13360 481 aaPredicted RBP14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 DHCR24Q15392 516 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 ANO4Q32M45 955 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 ALFQ53S48 1182 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 ARTNQ5T4W7 220 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 SLC9A4Q6AI14 798 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 BBS12Q6ZW61 710 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 CHST9Q7L1S5 443 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 CIR1Q86X95 450 aaPredicted RBP14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 LZTR1Q8N653 840 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 PQLC3Q8N755 202 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 RTL3Q8N8U3 475 aaKnown RBP14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 ACTRT1Q8TDG2 376 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 ASIC4Q96FT7 647 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 MS4A14Q96JA4 679 aa14.25□□□□□ -0.13
CYSTM1-202ENST00000504227 ZFYVE19Q96K21 471 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms