RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SAR1AQ9NR31 198 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 PCDHB12Q9Y5F1 795 aa16.88■□□□□ 0.29
PCDHA1-203ENST00000504120 KCNK1O00180 336 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 LTFP02788 710 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 TRAF2Q12933 501 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 KRR1Q13601 381 aaKnown RBP16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 IQSEC1Q6DN90 963 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 C11orf74Q86VG3 221 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 AHSPQ9NZD4 102 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 CKBP12277 381 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 MSH3P20585 1137 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 RBL1P28749 1068 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 TKTP29401 623 aaKnown RBP16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 VAC14Q08AM6 782 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 SOCS4Q8WXH5 440 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 USP20Q9Y2K6 914 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 TRPV2Q9Y5S1 764 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 MANSC4A6NHS7 340 aaPredicted RBP16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 CHADO15335 359 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 KRT20P35900 424 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC34A1Q06495 639 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 FASTKQ14296 549 aaKnown RBP16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 VSIG10LQ86VR7 867 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 NSMCE2Q96MF7 247 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 MRPL9Q9BYD2 267 aaKnown RBP16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 TBKBP1A7MCY6 615 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 CENPAP49450 140 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 CDK16Q00536 496 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 PWP1Q13610 501 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 PHKG1Q16816 387 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 RIPOR1Q6ZS17 1223 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 APBA2Q99767 749 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 MID1IP1Q9NPA3 183 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 PADI4Q9UM07 663 aa16.87■□□□□ 0.29
PCDHA1-203ENST00000504120 KNDC1Q76NI1 1749 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 A0A087X1B8 175 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 MSLNQ13421 630 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 FAM171A1Q5VUB5 890 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 LRRC55Q6ZSA7 311 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 DEFB132Q7Z7B7 95 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 DHFR2Q86XF0 187 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 ZFPM1Q8IX07 1006 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 PHACTR4Q8IZ21 702 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 ATG16L2Q8NAA4 619 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 HAS1Q92839 578 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 MIEF1Q9NQG6 463 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 CYP39A1Q9NYL5 469 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 IFRD1O00458 451 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 TCF3P15923 654 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 TMED10P49755 219 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 MAMLD1Q13495 774 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 ACVR2BQ13705 512 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 CNGA2Q16280 664 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 UNKQ9C0B0 810 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 NRDE2Q9H7Z3 1164 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 KLRC4O43908 158 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 CNOT3O75175 753 aaKnown RBP16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 LGALS2P05162 132 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 CCDC130P13994 396 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 NOS2P35228 1153 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 DLG4P78352 724 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC45A4Q5BKX6 768 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 TMC7Q7Z402 723 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 C10orf53Q8N6V4 93 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 BDH2Q9BUT1 245 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 CAPN10Q9HC96 672 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 ETNK2Q9NVF9 386 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 MT-CO1P00395 513 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 FAM58BPP0C7Q3 252 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 NUMBP49757 651 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 MIIPQ5JXC2 388 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 GPC2Q8N158 579 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 GLMNQ92990 594 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 TKTL2Q9H0I9 626 aa16.86■□□□□ 0.29
PCDHA1-203ENST00000504120 ATP9AO75110 1047 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 STAU1O95793 577 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 MYL4P12829 197 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 DARSP14868 501 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 UBA1P22314 1058 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 CYP2C18P33260 490 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 ZFP1Q6P2D0 407 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 GLT6D1Q7Z4J2 308 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 ADAM32Q8TC27 787 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 TMEM159Q96B96 161 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 PCYOX1Q9UHG3 505 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 RGS5O15539 181 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 DYRK3O43781 588 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 POU1F1P28069 291 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 CASP5P51878 434 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 NCF4Q15080 339 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 FNDC5Q8NAU1 212 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 WNT8BQ93098 351 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 TMEM79Q9BSE2 394 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 ZCCHC2Q9C0B9 1178 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 ABCC13Q9NSE7 274 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 TNFSF13BQ9Y275 285 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 ASTN1O14525 1302 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms