RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SHC2P98077 582 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 SF3A3Q12874 501 aaKnown RBP eCLIP4.61□□□□□ -1.67
SUB1-204ENST00000504016 MTX1Q13505 466 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 FAM110CQ1W6H9 321 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 FAM83BQ5T0W9 1011 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 ATPAF1Q5TC12 328 aaPredicted RBP4.61□□□□□ -1.67
SUB1-204ENST00000504016 DAB2IPQ5VWQ8 1189 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 LIN54Q6MZP7 749 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 ZNF549Q6P9A3 640 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 UBE2Q1Q7Z7E8 422 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 MPLKIPQ8TAP9 179 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 RUBCNQ92622 972 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 RTKNQ9BST9 563 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 KATNAL1Q9BW62 490 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 MAGEH1Q9H213 219 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 TP63Q9H3D4 680 aaPredicted RBP4.61□□□□□ -1.67
SUB1-204ENST00000504016 ELAC1Q9H777 363 aaKnown RBP4.61□□□□□ -1.67
SUB1-204ENST00000504016 PRDM16Q9HAZ2 1276 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 SEMA5BQ9P283 1151 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 DAPP1Q9UN19 280 aa4.61□□□□□ -1.67
SUB1-204ENST00000504016 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.61□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3DA0A087WVF3 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3IA0A087WXS9 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3EA0A087X179 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3KA0A087X1G2 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 LOC105369274A0A096LPK9 316 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 LOC102723532A0A0G2JNH3 316 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3BA6NDS4 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3FA6NER0 549 aaPredicted RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3LB9A6J9 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 SYT5O00445 386 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 INPPL1O15357 1258 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 SMAD6O43541 496 aaKnown RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 KRT38O76015 456 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3HP0C7X1 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 MATN1P21941 496 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 GRK5P34947 590 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 HOXD12P35452 270 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 CDKN2AP42771 156 aaKnown RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 PNLIPRP1P54315 467 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3GQ6DHY5 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3CQ6IPX1 549 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 RHPN2Q8IUC4 686 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TBC1D3Q8IZP1 549 aaPredicted RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 OR4N4Q8N0Y3 316 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 MMP21Q8N119 569 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 CSGALNACT1Q8TDX6 532 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 CLEC4CQ8WTT0 213 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 GLMPQ8WWB7 406 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 C3orf49Q96BT1 292 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 TRMT61AQ96FX7 289 aaKnown RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 LTV1Q96GA3 475 aaPredicted RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 FAR2Q96K12 515 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 FCRL5Q96RD9 977 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 ABHD14AQ9BUJ0 271 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 OSBPL5Q9H0X9 879 aaPredicted RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 PPCSQ9HAB8 311 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.6□□□□□ -1.67
SUB1-204ENST00000504016 HERC5Q9UII4 1024 aaKnown RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 CNTN6Q9UQ52 1028 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 UBE2J1Q9Y385 318 aaPredicted RBP4.6□□□□□ -1.67
SUB1-204ENST00000504016 PCDHA10Q9Y5I2 948 aa4.6□□□□□ -1.67
SUB1-204ENST00000504016 SLC22A23A1A5C7 686 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 FAM90A18PA6NE21 464 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 FAM90A16PA6NEW6 464 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 FAM90A9PA6NNJ1 464 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 FAM90A5PA8MXJ8 464 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 PLAUP00749 431 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 CD63P08962 238 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 T-ENOLP0DO92 83 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 SLC37A1P57057 533 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 TAS2R50P59544 299 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 AP2B1P63010 937 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 ANXA2RQ3ZCQ2 193 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 LRRC24Q50LG9 513 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 SPATA31A1Q5TZJ5 1347 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 JMJD6Q6NYC1 403 aaPredicted RBP4.59□□□□□ -1.67
SUB1-204ENST00000504016 WDR93Q6P2C0 686 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 CACNA2D3Q8IZS8 1091 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 TRAPPC9Q96Q05 1148 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 PAAF1Q9BRP4 392 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 TRIM2Q9C040 744 aa4.59□□□□□ -1.67
SUB1-204ENST00000504016 TAF1DQ9H5J8 278 aaPredicted RBP4.59□□□□□ -1.67
SUB1-204ENST00000504016 IPO5O00410 1097 aaKnown RBP4.58□□□□□ -1.68
SUB1-204ENST00000504016 NKX2-8O15522 239 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 UGDHO60701 494 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 ENO1P06733 434 aaKnown RBP4.58□□□□□ -1.68
SUB1-204ENST00000504016 RFPL3SP0C7P2 107 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 HOXA7P31268 230 aaPredicted RBP4.58□□□□□ -1.68
SUB1-204ENST00000504016 ZNF84P51523 738 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 PDCLQ13371 301 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 POSTNQ15063 836 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 TAF5Q15542 800 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 MANEAQ5SRI9 462 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 KIAA1324Q6UXG2 1013 aaKnown RBP4.58□□□□□ -1.68
SUB1-204ENST00000504016 ZNF793Q6ZN11 406 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 RFX6Q8HWS3 928 aa4.58□□□□□ -1.68
SUB1-204ENST00000504016 SLC44A2Q8IWA5 706 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms