RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 ATOH1Q92858 354 aaPredicted RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 HAPLN3Q96S86 360 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 PNKPQ96T60 521 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 DHX35Q9H5Z1 703 aaKnown RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 MARK1Q9P0L2 795 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 OR12D3Q9UGF7 316 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 STOML2Q9UJZ1 356 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 USP18Q9UMW8 372 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 AP4E1Q9UPM8 1137 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 REXO2Q9Y3B8 237 aaKnown RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 RIF1Q5UIP0 2472 aaKnown RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 COL4A3Q01955 1670 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 MACROD2A1Z1Q3 448 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 TBC1D3BA6NDS4 549 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 E9PAM4 449 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 DAPK3O43293 454 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 SPOPO43791 374 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 CACNG3O60359 315 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 CCDC175P0C221 793 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 GALK1P51570 392 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 SEC13P55735 322 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 LRRC32Q14392 662 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 KRT81Q14533 505 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 ACAP1Q15027 740 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 KCNT1Q5JUK3 1230 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 ACBD5Q5T8D3 534 aaPredicted RBP13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 TTC39BQ5VTQ0 682 aaPredicted RBP13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 BNIPLQ7Z465 357 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 TFAP2DQ7Z6R9 452 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 C14orf80Q86SX3 495 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 NTAN1Q96AB6 310 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 MYEOVQ96EZ4 313 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 ZNF830Q96NB3 372 aaPredicted RBP13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 EPAS1Q99814 870 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 LTB4R2Q9NPC1 389 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 FZD10Q9ULW2 581 aa13.82□□□□□ -0.2
PGGT1B-204ENST00000503638 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 I6L893 689 aaPredicted RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 NCAM2O15394 837 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 KAT7O95251 611 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 PENKP01210 267 aaPredicted RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 HOXD9P28356 352 aaPredicted RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 PCK1P35558 622 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 OPRD1P41143 372 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 ARHGAP25P42331 645 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 NUMBP49757 651 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 AIF1P55008 147 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 MLLT6P55198 1093 aaPredicted RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 STARD6P59095 220 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 TPI1P60174 286 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 CCZ1BP86790 482 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 ZNF177Q13360 481 aaPredicted RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 ERMARDQ5T6L9 678 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 DAAM2Q86T65 1068 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 PYROXD2Q8N2H3 581 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 IGSF8Q969P0 613 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 TBC1D31Q96DN5 1066 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 C1orf74Q96LT6 269 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 PEBP4Q96S96 227 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 NELL2Q99435 816 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 PRMT1Q99873 361 aaKnown RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 SNRNP25Q9BV90 132 aaKnown RBP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 CIPCQ9C0C6 399 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 ABCB8Q9NUT2 735 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 MPP6Q9NZW5 540 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 SIT1Q9Y3P8 196 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 HYOU1Q9Y4L1 999 aa13.81□□□□□ -0.2
PGGT1B-204ENST00000503638 SPTBN4Q9H254 2564 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 A0A1B0GVM2 712 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 TCAF2A6NFQ2 919 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 EEF2KO00418 725 aaKnown RBP13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 TRIM24O15164 1050 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 BUB1BO60566 1050 aaPredicted RBP13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 MTA2O94776 668 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 LUC7L3O95232 432 aaKnown RBP13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 EGFP01133 1207 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 DCNP07585 359 aaKnown RBP13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 TCF4P15884 667 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 DRD1P21728 446 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 TARSP26639 723 aaKnown RBP13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 EPHB2P29323 1055 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 MAN1A1P33908 653 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 EIF2DP41214 584 aaKnown RBP13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 GRIA2P42262 883 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 IRAK1P51617 712 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 SCAPQ12770 1279 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 GAB4Q2WGN9 574 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 MPP7Q5T2T1 576 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 FSTL4Q6MZW2 842 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 ASCL5Q7RTU5 278 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 ANKS1BQ7Z6G8 1248 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 CPNE8Q86YQ8 564 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 CCAR2Q8N163 923 aaKnown RBP13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 ARFGAP1Q8N6T3 406 aa13.8□□□□□ -0.2
PGGT1B-204ENST00000503638 TMEM105Q8N8V8 129 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms