RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 CNTN5O94779 1100 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PAPLNO95428 1278 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 GAS8O95995 478 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 C1RP00736 705 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 APOEP02649 317 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ZFXP17010 805 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 GJA1P17302 382 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 MCM3P25205 808 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 GABRR2P28476 465 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 EPHB2P29323 1055 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ATP5C1P36542 298 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PPP3CCP48454 512 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 NR2C2P49116 596 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 SGSHP51688 502 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 EPHA5P54756 1037 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 NTHL1P78549 312 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 GAD2Q05329 585 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 GALNT2Q10471 571 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 XRCC4Q13426 336 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 AUHQ13825 339 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 KCNC3Q14003 757 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PPP1R7Q15435 360 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 UAP1Q16222 522 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 SLC5A9Q2M3M2 681 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ALFQ53S48 1182 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 SLC45A4Q5BKX6 768 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PPM1LQ5SGD2 360 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ANKRD22Q5VYY1 191 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 RAP1GAP2Q684P5 730 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 TXNDC8Q6A555 127 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 HIBCHQ6NVY1 386 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 FBXL22Q6P050 247 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 TMCO3Q6UWJ1 677 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ARHGAP36Q6ZRI8 547 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ITIH5Q86UX2 942 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 CIR1Q86X95 450 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 RIN3Q8TB24 985 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 SHKBP1Q8TBC3 707 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ZSCAN18Q8TBC5 510 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 DEPDC1BQ8WUY9 529 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ZNF707Q96C28 371 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 TBC1D31Q96DN5 1066 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 TCEAL4Q96EI5 215 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ZNF419Q96HQ0 510 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 BTN2A3PQ96KV6 586 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 C1orf74Q96LT6 269 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PRICKLE1Q96MT3 831 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PWWP2AQ96N64 755 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 CDK5RAP1Q96SZ6 601 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 LGMNQ99538 433 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 GORASP1Q9BQQ3 440 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 EPB41L4BQ9H329 900 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PRO3102Q9H379 93 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PRDM12Q9H4Q4 367 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 PRDM16Q9HAZ2 1276 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 FAM114A2Q9NRY5 505 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ARGLU1Q9NWB6 273 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 MPP6Q9NZW5 540 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 WHRNQ9P202 907 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 DNMT3BQ9UBC3 853 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ASIC3Q9UHC3 531 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 VANGL2Q9ULK5 521 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 UTP11Q9Y3A2 253 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 HBS1LQ9Y450 684 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 ASB3Q9Y575 518 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 HCFC2Q9Y5Z7 792 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 COL4A3Q01955 1670 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 MYOFQ9NZM1 2061 aa7.11□□□□□ -1.27
TOPBP1-203ENST00000503464 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 A0A1W2PRU2 124 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 TCRBV7S3A2A0A539 114 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 DRGXA6NNA5 263 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 WASH4PA8MWX3 477 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 H7C0C1 242 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 DNALI1O14645 258 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 MAP2K7O14733 419 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 SCAMP3O14828 347 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 KCNN4O15554 427 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ACSL4O60488 711 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 TMEM63AO94886 807 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 IFNB1P01574 187 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 LRG1P02750 347 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 SRGAP2BP0DMP2 458 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 SLC2A3P11169 496 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 TACR2P21452 398 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 CORO1AP31146 461 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 HOXA9P31269 272 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 BMP8BP34820 402 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 HTR7P34969 479 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 CHKAP35790 457 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 HSPA9P38646 679 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ATP5OP48047 213 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ZNF135P52742 658 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 ITGA8P53708 1063 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 LMNB2Q03252 620 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 PPIDQ08752 370 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 WASHC5Q12768 1159 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 GPS1Q13098 491 aa7.1□□□□□ -1.27
TOPBP1-203ENST00000503464 HLTFQ14527 1009 aaKnown RBP eCLIP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms