RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ILDR2Q71H61 639 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 PTAR1Q7Z6K3 402 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 C4orf32Q8N8J7 132 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 KAT2BQ92831 832 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 SAC3D1A6NKF1 404 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 RNF103O00237 685 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 ADRB2P07550 413 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 PAX3P23760 479 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 RPA3P35244 121 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 DLG4P78352 724 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 WASHC5Q12768 1159 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 CAPSQ13938 189 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 KCNT2Q6UVM3 1135 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 KAT5Q92993 513 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 ZFYVE19Q96K21 471 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 ARMCX1Q9P291 453 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 CLCA2Q9UQC9 943 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 RTN3O95197 1032 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 SHBGP04278 402 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 ATP6V1B2P21281 511 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 AADACL2Q6P093 401 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 VAT1Q99536 393 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 KCTD14Q9BQ13 255 aaPredicted RBP16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 EMILIN2Q9BXX0 1053 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 ADGRE3Q9BY15 652 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 SORCS3Q9UPU3 1222 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 CHADO15335 359 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 ME2P23368 584 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 PSMD7P51665 324 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 BEX3Q00994 111 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 MAMLD1Q13495 774 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 RNF43Q68DV7 783 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 DUPD1Q68J44 220 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 MTMR14Q8NCE2 650 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 TMEM245Q9H330 911 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 PBX1P40424 430 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 DDX39BQ13838 428 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 ART4Q93070 314 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 TRAPPC9Q96Q05 1148 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 ACO2Q99798 780 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SLC25A13Q9UJS0 675 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 VAV3Q9UKW4 847 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 BAIAP3O94812 1187 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 TSHRP16473 764 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SKIV2L2P42285 1042 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 TBX4P57082 545 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 KRR1Q13601 381 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 TCHHL1Q5QJ38 904 aaPredicted RBP16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 FAM171A1Q5VUB5 890 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 DEFB128Q7Z7B8 93 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 PRELID2Q8N945 189 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SNRNP27Q8WVK2 155 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 TADA1Q96BN2 335 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SFMBT1Q9UHJ3 866 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 RBL1P28749 1068 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 RENBPP51606 427 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 DHFR2Q86XF0 187 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 BBS2Q9BXC9 721 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 CEP41Q9BYV8 373 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 VPS28Q9UK41 221 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SIGLEC16A6NMB1 481 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 TNFAIP8O95379 198 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SMIM10L2AP0DMW4 78 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SMIM10L2BP0DMW5 78 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 RAG1P15918 1043 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 TPH1P17752 444 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 PLD1Q13393 1074 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SCARA3Q6AZY7 606 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 TMC7Q7Z402 723 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SCUBE3Q8IX30 993 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 C12orf56Q8IXR9 622 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 CASP10Q92851 521 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 MAML3Q96JK9 1138 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 ZFRQ96KR1 1074 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 SENP8Q96LD8 212 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 ADAM2Q99965 735 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 CDT1Q9H211 546 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 RNPEPL1Q9HAU8 725 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 COMMD8Q9NX08 183 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 RHBDL2Q9NX52 303 aa16.49■□□□□ 0.23
HMGXB3-202ENST00000503427 PQBP1O60828 265 aaKnown RBP16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 UNC5CO95185 931 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 GJB6O95452 261 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 CNTN1Q12860 1018 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 DEFB106AQ8N104 65 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 CARNMT1Q8N4J0 409 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 POU5F2Q8N7G0 328 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 EDEM1Q92611 657 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 FAM136AQ96C01 138 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 APBA2Q99767 749 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 C2CD2Q9Y426 696 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 LIASO43766 372 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 ZSCAN5DPP0CG00 497 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 YWHAQP27348 245 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 TP53BP2Q13625 1128 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms