RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 SUN2Q9UH99 717 aa20.13■□□□□ 0.81
UBE2D3-215ENST00000503418 SLC12A6Q9UHW9 1150 aa20.13■□□□□ 0.81
UBE2D3-215ENST00000503418 CEP83Q9Y592 693 aa20.13■□□□□ 0.81
UBE2D3-215ENST00000503418 F5H5T6 163 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 FOXN3O00409 490 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 HSF2BPO75031 334 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 GLI1P08151 1106 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 CLCN1P35523 988 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 RAPGEF1Q13905 1077 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 EFHC1Q5JVL4 640 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 ZCCHC9Q8N567 271 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 SNX19Q92543 992 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 SLC2A13Q96QE2 648 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 MTG2Q9H4K7 406 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 PLCB1Q9NQ66 1216 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 DDIT4Q9NX09 232 aa20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 INTS6Q9UL03 887 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-215ENST00000503418 A0A1B0GTW7 788 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 METTL12A8MUP2 240 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 MOCS3O95396 460 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 DNTTP04053 509 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 ASLP04424 464 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 ERBB2P04626 1255 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 ABCB4P21439 1286 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 RPS14P62263 151 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 FOXC1Q12948 553 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 KCNJ12Q14500 433 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 PITRM1Q5JRX3 1037 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 C11orf57Q6ZUT1 292 aaPredicted RBP20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 DNASE2BQ8WZ79 361 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 TTC17Q96AE7 1141 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 PDCL3Q9H2J4 239 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 SAMSN1Q9NSI8 373 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 ASNSD1Q9NWL6 643 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 KIAA1522Q9P206 1035 aaPredicted RBP20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 NFE2L3Q9Y4A8 694 aa20.11■□□□□ 0.81
UBE2D3-215ENST00000503418 ACACBO00763 2458 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 KCNU1A8MYU2 1149 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 SLC2A3P11169 496 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 CCR1P32246 355 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 ACSL1P33121 698 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 NUMBP49757 651 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 SNX16P57768 344 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 SEMA3BQ13214 749 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 DRAP1Q14919 205 aaPredicted RBP20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 PTPN20Q4JDL3 420 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 ZNF776Q68DI1 518 aaPredicted RBP20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 OLFML1Q6UWY5 402 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 CIR1Q86X95 450 aaPredicted RBP20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 DHX40Q8IX18 779 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 FAM71AQ8IYT1 594 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 MYO19Q96H55 970 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 EIF2B4Q9UI10 523 aaKnown RBP20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 FHOD1Q9Y613 1164 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 CACNA1EQ15878 2313 aa20.1■□□□□ 0.81
UBE2D3-215ENST00000503418 CTSOP43234 321 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 BPIFB4P59827 614 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 SHC2P98077 582 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 ZBTB16Q05516 673 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 GRIK2Q13002 908 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 NME3Q13232 169 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 EIF4EBP2Q13542 120 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 TTC31Q49AM3 519 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 RNF219Q5W0B1 726 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 MRGPRX3Q96LB0 322 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 BTBD1Q9H0C5 482 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 C6orf106Q9H6K1 298 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 LMBRD1Q9NUN5 540 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 ERVW-1Q9UQF0 538 aa20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 NYNRINQ9P2P1 1898 aaKnown RBP20.09■□□□□ 0.81
UBE2D3-215ENST00000503418 PCNX2A6NKB5 2137 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 FAM170AA1A519 330 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 BCAT2O15382 392 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 SIN3BO75182 1162 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 DAB1O75553 588 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 SLC6A3Q01959 620 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 KCNMA1Q12791 1236 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 HNRNPA1L2Q32P51 320 aaKnown RBP20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 TCP11X2Q5H9J9 407 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 RABGAP1LQ5R372 815 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 KLHDC7AQ5VTJ3 777 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 SMYD5Q6GMV2 418 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 DPY19L2P1Q6NXN4 242 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 PIP4P1Q86T03 277 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 APCDD1Q8J025 514 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 GANCQ8TET4 914 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 PCED1AQ9H1Q7 454 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 DNAAF2Q9NVR5 837 aaKnown RBP20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 TAB2Q9NYJ8 693 aa20.08■□□□□ 0.81
UBE2D3-215ENST00000503418 TTC34A8MYJ7 566 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 UPK3BL1B0FP48 263 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 UPK3BL2E5RIL1 263 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 RNASEH1O60930 286 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 SEMA4FO95754 770 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 SRPRAP08240 638 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 PDGFRAP16234 1089 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 RNASE9P60153 205 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 ECT2LQ008S8 904 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 TTC39BQ5VTQ0 682 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms