RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CIR1Q86X95 450 aaPredicted RBP16.83■□□□□ 0.28
SCLT1-204ENST00000503215 APCDD1Q8J025 514 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 ZCCHC9Q8N567 271 aaKnown RBP16.83■□□□□ 0.28
SCLT1-204ENST00000503215 C1orf216Q8TAB5 229 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 SLC2A13Q96QE2 648 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 PRMT1Q99873 361 aaKnown RBP16.83■□□□□ 0.28
SCLT1-204ENST00000503215 DDX50Q9BQ39 737 aaKnown RBP16.83■□□□□ 0.28
SCLT1-204ENST00000503215 ADAM33Q9BZ11 813 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 IRX2Q9BZI1 471 aaPredicted RBP16.83■□□□□ 0.28
SCLT1-204ENST00000503215 NDST4Q9H3R1 872 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 EIF2B4Q9UI10 523 aaKnown RBP16.83■□□□□ 0.28
SCLT1-204ENST00000503215 PCDHGC3Q9UN70 934 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 WASF3Q9UPY6 502 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 CEP295Q9C0D2 2601 aa16.83■□□□□ 0.28
SCLT1-204ENST00000503215 FRYQ5TBA9 3013 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 KCNU1A8MYU2 1149 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 KRT37O76014 449 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 LUC7L3O95232 432 aaKnown RBP16.82■□□□□ 0.28
SCLT1-204ENST00000503215 APOEP02649 317 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 C7P10643 843 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
SCLT1-204ENST00000503215 IRAK1P51617 712 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 PTK2Q05397 1052 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 FOXC1Q12948 553 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 CDH18Q13634 790 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 E2F5Q15329 346 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 PTPN20Q4JDL3 420 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 PITRM1Q5JRX3 1037 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 WDR45BQ5MNZ6 344 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 OR6B2Q6IFH4 312 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 CHSY1Q86X52 802 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 FAM71AQ8IYT1 594 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 CADM4Q8NFZ8 388 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 FAM81BQ96LP2 452 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 CAMK1GQ96NX5 476 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 TUBGCP2Q9BSJ2 902 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 NUP62CLQ9H1M0 184 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 FAM204AQ9H8W3 233 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 LMBRD1Q9NUN5 540 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 SLCO3A1Q9UIG8 710 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 FHOD1Q9Y613 1164 aa16.82■□□□□ 0.28
SCLT1-204ENST00000503215 TTC34A8MYJ7 566 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 OPHN1O60890 802 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 SIN3BO75182 1162 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 GJB3O75712 270 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 TFE3P19532 575 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-204ENST00000503215 ERCC5P28715 1186 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-204ENST00000503215 GGCXP38435 758 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 GRIK2Q13002 908 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 DRAP1Q14919 205 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-204ENST00000503215 OLFML1Q6UWY5 402 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 RABEPKQ7Z6M1 372 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 DHX40Q8IX18 779 aaKnown RBP16.81■□□□□ 0.28
SCLT1-204ENST00000503215 BTN2A3PQ96KV6 586 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 IL21RQ9HBE5 538 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 DDIT4Q9NX09 232 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 ERVW-1Q9UQF0 538 aa16.81■□□□□ 0.28
SCLT1-204ENST00000503215 H0Y626 953 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 SYPP08247 313 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 GNSP15586 552 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 MZF1P28698 734 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-204ENST00000503215 STK19P49842 368 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-204ENST00000503215 CDK17Q00537 523 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 KCNJ12Q14500 433 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 C9orf64Q5T6V5 341 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 OTUD1Q5VV17 481 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-204ENST00000503215 C11orf57Q6ZUT1 292 aaPredicted RBP16.8■□□□□ 0.28
SCLT1-204ENST00000503215 HDDC3Q8N4P3 179 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 IGSF8Q969P0 613 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 RPL10LQ96L21 214 aaKnown RBP16.8■□□□□ 0.28
SCLT1-204ENST00000503215 TRIM62Q9BVG3 475 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 ANLNQ9NQW6 1124 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 DNAAF2Q9NVR5 837 aaKnown RBP16.8■□□□□ 0.28
SCLT1-204ENST00000503215 SERGEFQ9UGK8 458 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 SUN2Q9UH99 717 aa16.8■□□□□ 0.28
SCLT1-204ENST00000503215 A0A1B0GTW7 788 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 BCAT2O15382 392 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-204ENST00000503215 SH3BP5O60239 455 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 HSF2BPO75031 334 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 GLI1P08151 1106 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 VAV1P15498 845 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 KRT9P35527 623 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 SLC6A3Q01959 620 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 CENPCQ03188 943 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 NME3Q13232 169 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 RAPGEF1Q13905 1077 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 HNRNPA1L2Q32P51 320 aaKnown RBP16.79■□□□□ 0.28
SCLT1-204ENST00000503215 EFHC1Q5JVL4 640 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 KLHDC7AQ5VTJ3 777 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 FBXL22Q6P050 247 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 C14orf80Q86SX3 495 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 FAM114A1Q8IWE2 563 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 ATP6V0D2Q8N8Y2 350 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 OR52K2Q8NGK3 314 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 SNX19Q92543 992 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 NAA15Q9BXJ9 866 aaKnown RBP16.79■□□□□ 0.28
SCLT1-204ENST00000503215 RSPH9Q9H1X1 276 aaPredicted RBP16.79■□□□□ 0.28
SCLT1-204ENST00000503215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCLT1-204ENST00000503215 ASNSD1Q9NWL6 643 aa16.79■□□□□ 0.28
SCLT1-204ENST00000503215 TAB2Q9NYJ8 693 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms