RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PMF1Q6P1K2 205 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 IQCHQ86VS3 1027 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 MFN1Q8IWA4 741 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 LMO3Q8TAP4 145 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 SETD7Q8WTS6 366 aaKnown RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 BHMTQ93088 406 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 EEF2KMTQ96G04 330 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 DHTKD1Q96HY7 919 aaPredicted RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 MRGPRX3Q96LB0 322 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 FAM81BQ96LP2 452 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 CEP63Q96MT8 703 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 PPP1R9BQ96SB3 815 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 ACE2Q9BYF1 805 aaPredicted RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 MIR1-1HGQ9H1L0 117 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 PABPC3Q9H361 631 aaKnown RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 IL21RQ9HBE5 538 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 ABCB8Q9NUT2 735 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 ARMCX3Q9UH62 379 aaPredicted RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 SFMBT1Q9UHJ3 866 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 SNX11Q9Y5W9 270 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 ACACAQ13085 2346 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 ANKRD11Q6UB99 2663 aaPredicted RBP6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 BAHCC1Q9P281 2608 aa6.34□□□□□ -1.39
LSM3P4-201ENST00000502948 KNTC1P50748 2209 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 MYLKQ15746 1914 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ATRXP46100 2492 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 EDDM13A0A1B0GTR0 161 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 CXorf51AA0A1B0GTR3 108 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 A0A1B0GVT2 93 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 LRRC72A6NJI9 287 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 TULP2O00295 520 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ALOX15BO15296 676 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 GABBR2O75899 941 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 LUC7L3O95232 432 aaKnown RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SMC2O95347 1197 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 MOCS3O95396 460 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ADH1BP00325 375 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 IGLV3-25P01717 112 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 FYNP06241 537 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 GLI1P08151 1106 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 HMBSP08397 361 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ATXN1LP0C7T5 689 aaKnown RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC2A3P11169 496 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 HLA-EP13747 358 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 GOT1P17174 413 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC6A4P31645 630 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 CD70P32970 193 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 GPD2P43304 727 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 CSNK1EP49674 416 aaKnown RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 GALCP54803 685 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 TBX4P57082 545 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 COL9A2Q14055 689 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ELAVL3Q14576 367 aaKnown RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 RTP5Q14D33 572 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 FOXD4L6Q3SYB3 417 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SOWAHCQ53LP3 525 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 MS4A13Q5J8X5 152 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 C9orf64Q5T6V5 341 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SFMBT2Q5VUG0 894 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 FOXD4L3Q6VB84 417 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SND1Q7KZF4 910 aaKnown RBP eCLIP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 TMEM110Q86TL2 294 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 PDZD3Q86UT5 571 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 CCDC117Q8IWD4 279 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 FMR1NBQ8N0W7 255 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 PNPLA1Q8N8W4 532 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 OR2T34Q8NGX1 318 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 FAM174AQ8TBP5 190 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SAP25Q8TEE9 199 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SORCS1Q8WY21 1168 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 RFFLQ8WZ73 363 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 TSC1Q92574 1164 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 BTN2A3PQ96KV6 586 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 FCRL2Q96LA5 508 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 NT5C1BQ96P26 610 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ELF4Q99607 663 aaPredicted RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 NRSN2Q9GZP1 204 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 MMRN2Q9H8L6 949 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 ASNSD1Q9NWL6 643 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 HOOK1Q9UJC3 728 aaKnown RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 INTS6Q9UL03 887 aaKnown RBP6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 MAPK8IP1Q9UQF2 711 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 DMTF1Q9Y222 760 aa6.33□□□□□ -1.4
LSM3P4-201ENST00000502948 KNL1Q8NG31 2342 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 URB1O60287 2271 aaKnown RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 ARID1BQ8NFD5 2236 aaPredicted RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 DOCK4Q8N1I0 1966 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 SHROOM3Q8TF72 1996 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 A0A1W2PR77 199 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 BICDL2A1A5D9 508 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 TRABD2BA6NFA1 517 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 H0Y8X5 98 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 PSMA7O14818 248 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 TBL1XO60907 577 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 GNA14O95837 355 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 HOXB3P14651 431 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms