RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GPRC5AQ8NFJ5 357 aa17.58■□□□□ 0.41
HMGXB3-201ENST00000502717 DEFB129Q9H1M3 183 aa17.58■□□□□ 0.41
HMGXB3-201ENST00000502717 NDUFAF1Q9Y375 327 aa17.58■□□□□ 0.41
HMGXB3-201ENST00000502717 PPME1Q9Y570 386 aa17.58■□□□□ 0.41
HMGXB3-201ENST00000502717 LINGO3P0C6S8 592 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 CRHR1P34998 444 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 NME5P56597 212 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 RPL7AP62424 266 aaKnown RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 LRRC8DQ7L1W4 858 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 RNF180Q86T96 592 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 KCNMB4Q86W47 210 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 POLR1BQ9H9Y6 1135 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 GPRC5DQ9NZD1 345 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 LTN1O94822 1766 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 SOAT2O75908 522 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 MOCS2O96007 188 aaPredicted RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 ITGA2BP08514 1039 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 ATP6V1B2P21281 511 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 CBX3Q13185 183 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 BFSP2Q13515 415 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 FASTKD3Q14CZ7 662 aaKnown RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 CYP51A1Q16850 503 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 OTUD3Q5T2D3 398 aaPredicted RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 HPS6Q86YV9 775 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 GNEQ9Y223 722 aaKnown RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 MED1Q15648 1581 aaPredicted RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 PSMD12O00232 456 aaPredicted RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 FKBP9O95302 570 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 JAK1P23458 1154 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 FOXD4Q12950 439 aaPredicted RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 FRG1Q14331 258 aaKnown RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 RNASEH2BQ5TBB1 312 aaKnown RBP17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 FKBP9P1Q75LS8 142 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 NSMCE2Q96MF7 247 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 TMEM165Q9HC07 324 aa17.58■□□□□ 0.4
HMGXB3-201ENST00000502717 NCAM2O15394 837 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 CRABP2P29373 138 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 RAP1GAPP47736 663 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 TSPY1Q01534 308 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 ZNF235Q14590 738 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 FAM98BQ52LJ0 330 aaKnown RBP17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 BTBD8Q5XKL5 378 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 KCNT2Q6UVM3 1135 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 TTC30AQ86WT1 665 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 BANPQ8N9N5 519 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 RNPEPQ9H4A4 650 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 NDUFS3O75489 264 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 HMGCRP04035 888 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 SUPT20HL2P0C7V6 817 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 PIK3R1P27986 724 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 RECQLP46063 649 aaPredicted RBP17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 NPY2RP49146 381 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 VEPH1Q14D04 833 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 RNF219Q5W0B1 726 aaPredicted RBP17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 SEC14L1Q92503 715 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 MKL1Q969V6 931 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 SMARCAD1Q9H4L7 1026 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 EXOSC4Q9NPD3 245 aaKnown RBP17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 FAM8A1Q9UBU6 413 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 RAP2CQ9Y3L5 183 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 M0QYT0 321 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 PEX2P28328 305 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 SOX6P35712 828 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 SOX10P56693 466 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 CDC42EP1Q00587 391 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 CSHL1Q14406 222 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 TRIM69Q86WT6 500 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 YAF2Q8IY57 180 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 OR6J1Q8NGC5 347 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 DPF3Q92784 378 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 RCN3Q96D15 328 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 TUBGCP5Q96RT8 1024 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 TMEM191CA6NGB0 347 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 LYPLA1O75608 230 aaPredicted RBP17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 RORBQ92753 470 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 SEPHS2Q99611 448 aa17.57■□□□□ 0.4
HMGXB3-201ENST00000502717 ADGRA2Q96PE1 1338 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 WTIPA6NIX2 430 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 SNAP91O60641 907 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 ATP6V1G1O75348 118 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 CCNA2P20248 432 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 DMPKQ09013 629 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 MSLNQ13421 630 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 PCSK7Q16549 785 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 BRSK2Q8IWQ3 736 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 CATSPERBQ9H7T0 1116 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 TMEM247A6NEH6 219 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 CD4P01730 458 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 KLF10Q13118 480 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 GALNTL6Q49A17 601 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 RSBN1Q5VWQ0 802 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 SCARA3Q6AZY7 606 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 SFRP1Q8N474 314 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 LRRC71Q8N4P6 559 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 DRAXINQ8NBI3 349 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 TRIM63Q969Q1 353 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 VPS33AQ96AX1 596 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 ZNF556Q9HAH1 456 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms