RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 REC114Q7Z4M0 266 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 NOP9Q86U38 636 aaKnown RBP5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 SLC47A2Q86VL8 602 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM228AQ86W67 206 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 JAMLQ86YT9 394 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 RHOT2Q8IXI1 618 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 EFCAB13Q8IY85 973 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 TMEM192Q8IY95 271 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 DCLK2Q8N568 766 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 RBBP8NLQ8NC74 664 aaPredicted RBP5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 MNS1Q8NEH6 495 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 ATRIPQ8WXE1 791 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 HPDLQ96IR7 371 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 SYT11Q9BT88 431 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 EIF2AQ9BY44 585 aaKnown RBP5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 ISCUQ9H1K1 167 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 SLITRK6Q9H5Y7 841 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 L2HGDHQ9H9P8 463 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 CYP3A43Q9HB55 503 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 APOBEC3GQ9HC16 384 aaKnown RBP5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 GFOD1Q9NXC2 390 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 DPP3Q9NY33 737 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 CLDND1Q9NY35 253 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 TRIM10Q9UDY6 481 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 PARP2Q9UGN5 583 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 CDC23Q9UJX2 597 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 ST3GAL5Q9UNP4 418 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 AGAP1Q9UPQ3 857 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 CNTN6Q9UQ52 1028 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 SAR1BQ9Y6B6 198 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 SCN10AQ9Y5Y9 1956 aa5.6□□□□□ -1.51
HMGXB4-208ENST00000498325 TMCO5BA8MYB1 307 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 LOC730098B7Z3J9 87 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CYR61O00622 381 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 THAP12O43422 761 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 BUB1O43683 1085 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CLEC3AO75596 197 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 PLATP00750 562 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CHRNA1P02708 482 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 FTLP02792 175 aaPredicted RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 MMEP08473 750 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 PAEPP09466 180 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 MYBL1P10243 752 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 ITGA4P13612 1032 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 KCNE1P15382 129 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CHRNB2P17787 502 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 TCP1P17987 556 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CYP3A5P20815 502 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 ACO1P21399 889 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 POLR2BP30876 1174 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 PNPLA4P41247 253 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 MC3RP41968 323 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 RAB27AP51159 221 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM193AP78312 1265 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 FMO1Q01740 532 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CKAP4Q07065 602 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 MGAT3Q09327 533 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 PAK2Q13177 524 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 TCEAL1Q15170 157 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 ZBTB6Q15916 424 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 WHAMMP3Q1A5X7 153 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 XKR4Q5GH76 650 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 LIN9Q5TKA1 542 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 PAPD7Q5XG87 772 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 HLA-DQA1Q5Y7H0 255 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 ACAD10Q6JQN1 1059 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CRTC3Q6UUV7 619 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 ALKAL1Q6UXT8 129 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 LRRC52Q8N7C0 313 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 SLC20A1Q8WUM9 679 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 RFFLQ8WZ73 363 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 DVL3Q92997 716 aaPredicted RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 PGBD4Q96DM1 585 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 MRPL38Q96DV4 380 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 VCPIP1Q96JH7 1222 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 RPGRIP1Q96KN7 1286 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 RIPOR3Q96MK2 946 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF560Q96MR9 790 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 TGS1Q96RS0 853 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 C17orf80Q9BSJ5 609 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 APOL6Q9BWW8 343 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 PACSIN1Q9BY11 444 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF518BQ9C0D4 1074 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 UBN1Q9NPG3 1134 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CISHQ9NSE2 258 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 GMIPQ9P107 970 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 UVRAGQ9P2Y5 699 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 RNF14Q9UBS8 474 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 PUF60Q9UHX1 559 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 NOCTQ9UK39 431 aaKnown RBP5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 KIAA1257Q9ULG3 409 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 NENFQ9UMX5 172 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 TFR2Q9UP52 801 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 GIT1Q9Y2X7 761 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 HYOU1Q9Y4L1 999 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 IPPQ9Y573 584 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 CEP83Q9Y592 693 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 MRFAP1Q9Y605 127 aa5.59□□□□□ -1.51
HMGXB4-208ENST00000498325 TRIP12Q14669 1992 aaPredicted RBP5.58□□□□□ -1.52
HMGXB4-208ENST00000498325 ANK1P16157 1881 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms