RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 PRSS22Q9GZN4 317 aa5.46□□□□□ -1.54
SSR3-209ENST00000498205 CHMP4BQ9H444 224 aaKnown RBP5.46□□□□□ -1.54
SSR3-209ENST00000498205 SAP30LQ9HAJ7 183 aa5.46□□□□□ -1.54
SSR3-209ENST00000498205 ABHD10Q9NUJ1 306 aa5.46□□□□□ -1.54
SSR3-209ENST00000498205 FBXO28Q9NVF7 368 aa5.46□□□□□ -1.54
SSR3-209ENST00000498205 ARL8BQ9NVJ2 186 aa5.46□□□□□ -1.54
SSR3-209ENST00000498205 MAGED2Q9UNF1 606 aaPredicted RBP5.46□□□□□ -1.54
SSR3-209ENST00000498205 KIF16BQ96L93 1317 aa5.46□□□□□ -1.54
SSR3-209ENST00000498205 SIGLEC1Q9BZZ2 1709 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 PTPRMP28827 1452 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 PREX1Q8TCU6 1659 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 GXYLT2A0PJZ3 443 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 CTIFO43310 598 aaKnown RBP5.45□□□□□ -1.54
SSR3-209ENST00000498205 PRAMEF2O60811 474 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 CD63P08962 238 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 NPPBP16860 134 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 YY1P25490 414 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 MPGP29372 298 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 RARSP54136 660 aaKnown RBP5.45□□□□□ -1.54
SSR3-209ENST00000498205 DAZAP2Q15038 168 aaPredicted RBP5.45□□□□□ -1.54
SSR3-209ENST00000498205 P3H1Q32P28 736 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 MTX3Q5HYI7 312 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 UEVLDQ8IX04 471 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 DDB2Q92466 427 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 AS3MTQ9HBK9 375 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 SCAF8Q9UPN6 1271 aaKnown RBP5.45□□□□□ -1.54
SSR3-209ENST00000498205 SPATA31A5Q5VU36 1347 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 SPATA31A7Q8IWB4 1347 aa5.45□□□□□ -1.54
SSR3-209ENST00000498205 PIK3R4Q99570 1358 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.44□□□□□ -1.54
SSR3-209ENST00000498205 J3KTA2 159 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 TECPR2O15040 1411 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 NPC1O15118 1278 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 SKAP2O75563 359 aaPredicted RBP5.44□□□□□ -1.54
SSR3-209ENST00000498205 BCAR3O75815 825 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 MBPP02686 304 aaPredicted RBP5.44□□□□□ -1.54
SSR3-209ENST00000498205 TNFAIP2Q03169 654 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 OS9Q13438 667 aaPredicted RBP5.44□□□□□ -1.54
SSR3-209ENST00000498205 MORC3Q14149 939 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 BECN1Q14457 450 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 C20orf194Q5TEA3 1177 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 SPATA31D1Q6ZQQ2 1576 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 MYLK4Q86YV6 388 aaPredicted RBP5.44□□□□□ -1.54
SSR3-209ENST00000498205 ZNF527Q8NB42 609 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 PRSS3P2Q8NHM4 247 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 RPL36ALQ969Q0 106 aaKnown RBP5.44□□□□□ -1.54
SSR3-209ENST00000498205 C1QTNF7Q9BXJ2 289 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 RWDD1Q9H446 243 aaPredicted RBP5.44□□□□□ -1.54
SSR3-209ENST00000498205 ERVK-5Q9HDB9 667 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 KCNK9Q9NPC2 374 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 CHST12Q9NRB3 414 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 TERF2IPQ9NYB0 399 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 FNIP2Q9P278 1114 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 ISY1Q9ULR0 285 aaKnown RBP5.44□□□□□ -1.54
SSR3-209ENST00000498205 BTBD3Q9Y2F9 522 aa5.44□□□□□ -1.54
SSR3-209ENST00000498205 KIF24Q5T7B8 1368 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 SMIM35A0A1B0GVV1 85 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 DNAJC9-AS1A6NH13 148 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 DHHO43323 396 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 ANXA6P08133 673 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 SLC8A1P32418 973 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 HOXD12P35452 270 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 MMP13P45452 471 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 RPS13P62277 151 aaKnown RBP5.43□□□□□ -1.54
SSR3-209ENST00000498205 RAE1P78406 368 aaKnown RBP5.43□□□□□ -1.54
SSR3-209ENST00000498205 CALD1Q05682 793 aaKnown RBP5.43□□□□□ -1.54
SSR3-209ENST00000498205 SLC14A1Q13336 389 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 ALDH1L2Q3SY69 923 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 XRRA1Q6P2D8 792 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 DEF8Q6ZN54 512 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 PIK3AP1Q6ZUJ8 805 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 TCP11L2Q8N4U5 519 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 FAM71BQ8TC56 605 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 SMG7Q92540 1137 aaKnown RBP5.43□□□□□ -1.54
SSR3-209ENST00000498205 ARHGAP45Q92619 1136 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 AKAP1Q92667 903 aaKnown RBP eCLIP5.43□□□□□ -1.54
SSR3-209ENST00000498205 MAP4K1Q92918 833 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 PRPF18Q99633 342 aaKnown RBP5.43□□□□□ -1.54
SSR3-209ENST00000498205 TMEM79Q9BSE2 394 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 TP63Q9H3D4 680 aaPredicted RBP5.43□□□□□ -1.54
SSR3-209ENST00000498205 CDCP1Q9H5V8 836 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 TUBA8Q9NY65 449 aaPredicted RBP5.43□□□□□ -1.54
SSR3-209ENST00000498205 ZNF70Q9UC06 446 aaPredicted RBP5.43□□□□□ -1.54
SSR3-209ENST00000498205 PCDHB7Q9Y5E2 793 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 CD163L1Q9NR16 1453 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 KNDC1Q76NI1 1749 aa5.43□□□□□ -1.54
SSR3-209ENST00000498205 FAM135BQ49AJ0 1406 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 YTHDC2Q9H6S0 1430 aaKnown RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 ABHD14A-ACY1A0A1B0GW23 586 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 E5RJQ4 531 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 INO80B-WBP1J3KQ70 363 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 SGPL1O95470 568 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 ITGA5P08648 1049 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 ATP5F1P24539 256 aaPredicted RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 PLCD1P51178 756 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 SLC12A2P55011 1212 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 ICA1Q05084 483 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 PTK2BQ14289 1009 aa5.42□□□□□ -1.54
SSR3-209ENST00000498205 MVPQ14764 893 aaKnown RBP5.42□□□□□ -1.54
SSR3-209ENST00000498205 ZNF626Q68DY1 528 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms