RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TYRP14679 529 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 HOXD9P28356 352 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-227ENST00000498056 MLLT6P55198 1093 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-227ENST00000498056 NRG1Q02297 640 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-227ENST00000498056 MMRN1Q13201 1228 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 SEMA3BQ13214 749 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 ZNF211Q13398 564 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-227ENST00000498056 TDGQ13569 410 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 CDH18Q13634 790 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 RUNX3Q13761 415 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 DPYSL3Q14195 570 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 PDK2Q15119 407 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 RPS6KA1Q15418 735 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 MPPE1Q53F39 396 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 SEL1L2Q5TEA6 688 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 RFX8Q6ZV50 586 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 TMEM25Q86YD3 366 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 MAP7D3Q8IWC1 876 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 CARNMT1Q8N4J0 409 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 SLC44A3Q8N4M1 653 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-227ENST00000498056 RAPGEF5Q92565 580 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 C1orf74Q96LT6 269 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 WDR24Q96S15 920 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 ZNF670Q9BS34 389 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 ZYG11BQ9C0D3 744 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 ECT2Q9H8V3 914 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 MPP6Q9NZW5 540 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 JRKLQ9Y4A0 524 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 PCDHA3Q9Y5H8 950 aa13.99□□□□□ -0.17
CPNE1-227ENST00000498056 KCNK3O14649 394 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 FGF10O15520 208 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-227ENST00000498056 CNTN5O94779 1100 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 KDELR1P24390 212 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 GAD2Q05329 585 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 KDSRQ06136 332 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 LLGL1Q15334 1064 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 ITPRIPL2Q3MIP1 535 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 ALFQ53S48 1182 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 DCAF12L1Q5VU92 463 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 KAZNQ674X7 775 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 SPOCD1Q6ZMY3 1216 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 RFX6Q8HWS3 928 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 MFN1Q8IWA4 741 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 CCDC117Q8IWD4 279 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-227ENST00000498056 ZNF683Q8IZ20 524 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 EXD1Q8NHP7 514 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 TMA16Q96EY4 203 aaKnown RBP13.98□□□□□ -0.17
CPNE1-227ENST00000498056 NECAB3Q96P71 396 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-227ENST00000498056 CSPG4P5Q96PW8 444 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 NAPGQ99747 312 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-227ENST00000498056 TLR10Q9BXR5 811 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 CATSPERBQ9H7T0 1116 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 CWC15Q9P013 229 aaKnown RBP13.98□□□□□ -0.17
CPNE1-227ENST00000498056 RCOR3Q9P2K3 495 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-227ENST00000498056 SORCS3Q9UPU3 1222 aa13.98□□□□□ -0.17
CPNE1-227ENST00000498056 IGLV3-10A0A075B6K4 115 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 H0Y626 953 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 ARNTLO00327 626 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 GFRA2O00451 464 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 HOXC11O43248 304 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-227ENST00000498056 LUC7L3O95232 432 aaKnown RBP13.97□□□□□ -0.17
CPNE1-227ENST00000498056 PENKP01210 267 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-227ENST00000498056 SRFP11831 508 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 HOXC13P31276 330 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 CXCR5P32302 372 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 HTR7P34969 479 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 SOX9P48436 509 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 ARSEP51690 589 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 ZNF135P52742 658 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-227ENST00000498056 DYNLT1P63172 113 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 NR1H3Q13133 447 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 DPYSQ14117 519 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 TJAP1Q5JTD0 557 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 AADACL2Q6P093 401 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 RHBDF2Q6PJF5 856 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 MFSD7Q6UXD7 560 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 SYT10Q6XYQ8 523 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 CHST9Q7L1S5 443 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 RNF135Q8IUD6 432 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 NAT16Q8N8M0 369 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 DNASE1L2Q92874 299 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 P2RY11Q96G91 374 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 ARHGEF4Q9NR80 690 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 MARK1Q9P0L2 795 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 PPARGC1AQ9UBK2 798 aaKnown RBP13.97□□□□□ -0.17
CPNE1-227ENST00000498056 DNAI1Q9UI46 699 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 DUSP12Q9UNI6 340 aa13.97□□□□□ -0.17
CPNE1-227ENST00000498056 MYO18AQ92614 2054 aaKnown RBP13.97□□□□□ -0.17
CPNE1-227ENST00000498056 CTAGE9A4FU28 777 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 OTOL1A6NHN0 477 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-227ENST00000498056 C3orf70A6NLC5 250 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-227ENST00000498056 CACNG3O60359 315 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 ZRANB2O95218 330 aaKnown RBP eCLIP13.96□□□□□ -0.17
CPNE1-227ENST00000498056 RHOCP08134 193 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 RHOQP17081 205 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 ERCC2P18074 760 aa13.96□□□□□ -0.17
CPNE1-227ENST00000498056 AMPD1P23109 780 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms