RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 INMTO95050 263 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 BAG4O95429 457 aaKnown RBP6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 DNTTP04053 509 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 GSTM1P09488 218 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 OR52Z1P0C646 297 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 RAC2P15153 192 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 FOSL2P15408 326 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 RPA1P27694 616 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 SDHAP31040 664 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 CD52P31358 61 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 GJA4P35212 333 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 TUBP50607 506 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 RABGGTBP53611 331 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 CDK17Q00537 523 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 CREMQ03060 361 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 CHRNEQ04844 493 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 WASHC5Q12768 1159 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 PDIA5Q14554 519 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 CALCRLQ16602 461 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 TIGD6Q17RP2 521 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 RILPL1Q5EBL4 403 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 HECTD3Q5T447 861 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 KLHDC7AQ5VTJ3 777 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 KIAA1614Q5VZ46 1190 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 ARL6IP4Q66PJ3 421 aaKnown RBP6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 MBLAC2Q68D91 279 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 TANGO2Q6ICL3 276 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 FBXO38Q6PIJ6 1188 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 ANKS4BQ8N8V4 417 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 ANKRD52Q8NB46 1076 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 MAFAQ8NHW3 353 aaPredicted RBP6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 ADAMTS15Q8TE58 950 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 MYLIPQ8WY64 445 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 IQCDQ96DY2 449 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 MAP7D2Q96T17 732 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 SEMA4AQ9H3S1 761 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 POFUT1Q9H488 388 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 EPB41L1Q9H4G0 881 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 TTC12Q9H892 705 aaPredicted RBP6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 SAYSD1Q9NPB0 183 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 XPNPEP1Q9NQW7 623 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 MRGBPQ9NV56 204 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 DBR1Q9UK59 544 aaKnown RBP6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 DSEQ9UL01 958 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 PCDHA12Q9UN75 941 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 SNX5Q9Y5X3 404 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 MTCH2Q9Y6C9 303 aa6.29□□□□□ -1.4
TMEM39A-212ENST00000497993 TSC2P49815 1807 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 GTPBP10A4D1E9 387 aaKnown RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 FITM1A5D6W6 292 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 F8W8V4 182 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 H3BNC9 293 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 H3BUI4 141 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ASAP2O43150 1006 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 AHCYL1O43865 530 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 NPHS1O60500 1241 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ZNF623O75123 536 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 TMEM127O75204 238 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 RPS6KA5O75582 802 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 HPXP02790 462 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 STAG3L1P0CL83 205 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 COL6A2P12110 1019 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 MYOGP15173 224 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ATF7P17544 494 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 YWHABP31946 246 aaKnown RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 KIR2DL1P43626 348 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 KIR2DL2P43627 348 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 RARRES1P49788 294 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 CLCN3P51790 818 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 HK2P52789 917 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 HK3P52790 923 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 NR1H2P55055 460 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 RNASE9P60153 205 aaKnown RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ARF3P61204 181 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ARF1P84077 181 aaKnown RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ATP2C1P98194 919 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 DSC2Q02487 901 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 NR0B2Q15466 257 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 TTC38Q5R3I4 469 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 HAUS3Q68CZ6 603 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 EFCAB12Q6NXP0 572 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 SLC24A5Q71RS6 500 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 KRT74Q7RTS7 529 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 NRSN1Q8IZ57 195 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 MYOCDQ8IZQ8 938 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 C3orf20Q8ND61 904 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 FAM71BQ8TC56 605 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ATP2A3Q93084 1043 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 SLC35A4Q96G79 324 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 FCRL2Q96LA5 508 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 PTCHD1Q96NR3 888 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 TSPAN18Q96SJ8 248 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 G6PC3Q9BUM1 346 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ADI1Q9BV57 179 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 FAM49AQ9H0Q0 323 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 PRDM12Q9H4Q4 367 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 LMBRD1Q9NUN5 540 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 TMEM161AQ9NX61 479 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 TNFRSF10DQ9UBN6 386 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms